Cystobacter fuscus: CYFUS_008886
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Entry
CYFUS_008886 CDS
T05065
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cfus
Cystobacter fuscus
Pathway
cfus03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYFUS_008886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfus03400
]
CYFUS_008886
Enzymes [BR:
cfus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CYFUS_008886
DNA repair and recombination proteins [BR:
cfus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYFUS_008886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATB43406
UniProt:
A0A250JJW0
LinkDB
All DBs
Position
complement(11097875..11098378)
Genome browser
AA seq
167 aa
AA seq
DB search
MQDVIAPGLKVLFCGINPSVYSAVVRHHFARPGNRFWPALYASGFTDRLLSPHEQGELLV
RGYGITNVVEEASVAADSLTARDYAEGGRKLEAKVRRYQPRYLAVLGIGAWRTAFGKPKA
LLGLQSELLAGTRVWVLPNPSGLNAHYRPADLARMFRELRLAVAAGG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtcatcgctcccggcctgaaggtcctcttctgcggcatcaacccgagcgtg
tactcggccgtcgtgcgccaccacttcgcgaggccgggcaaccgcttctggccggcgctg
tacgcctcgggcttcacggaccggttgctctccccccacgagcagggggagttgctcgtg
cgtggctacggcatcaccaacgtggtggaggaggcgtcggtcgcggcggactcgctgacg
gcgcgggactacgccgagggcggtcggaagctggaggccaaggtgcggcgctaccaaccg
cgctacctggcggtgctgggcattggcgcgtggcgcacggcgttcggcaagccgaaggcc
ctgctgggattgcaatcggagctgctggcgggcacccgcgtctgggtgcttcccaatccg
agcggactcaacgcgcactaccgccccgcggacctggcgcggatgttccgcgagctgcgt
ctggcggtggcggcgggcggctaa
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integrated database retrieval system
