Campylobacter fetus subsp. venerealis cfvi03/293: CFVI03293_0003
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Entry
CFVI03293_0003 CDS
T03000
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cfv
Campylobacter fetus subsp. venerealis cfvi03/293
Brite
KEGG Orthology (KO) [BR:
cfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfv03032
]
CFVI03293_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
cfv03400
]
CFVI03293_0003 (gyrB)
Enzymes [BR:
cfv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFVI03293_0003 (gyrB)
DNA replication proteins [BR:
cfv03032
]
Prokaryotic type
DNA Topoisomerases
CFVI03293_0003 (gyrB)
DNA repair and recombination proteins [BR:
cfv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFVI03293_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AHE93357
LinkDB
All DBs
Position
2528..4849
Genome browser
AA seq
773 aa
AA seq
DB search
MENLEKNYGAGNIKVLKGLEAVRKRPGMYIGDTNISGLHHMIYEVVDNSIDESMAGYCDT
INIELTREGSCIVTDNGRGIPVDIHPTEKISAATVVLTVLHAGGKFDKDTYKVSGGLHGV
GVSVVNALSKKLILNIKRDGNLYRQEFSKGIPQNILEAVKTTNRTGTSVEFWPDDDIFEV
TEFDKQILSKRFKELAYLNPRITINFKDQRDGFSETYHFEGGLESFVTDINKSNPVSKAV
SFSGGEEDVIVDFALLYNETYTENLLSFVNNIKTPDGGTHEAGFRAGLTRAITNYIAANA
AAREKDTKITGDDIREGLIAIVSVKVPEPQFEGQTKGKLGSSYVKPIVQKMTFDVLCKYF
EENPIEAKAIMNKALMAARGREAAKKARDLTRKKDSLNSVGTLPGKLADCQSKDPSESEI
YLVEGDSAGGSAKQGRDRAFQAILPLRGKILNVEKSRLDKILKSEEIKNMITAFGCGIGE
EFDPEKLRYHKIIIMTDADVDGSHIQTLLLTFFFRFLTPIIENGYVYLAQPPLYRYKKGK
KEIYLKDEKALNEFLIETGIEGEDFEGVGNKDLIDYLKIIAAYRSILMDLKKRFNVLIVI
RYMIENPDVIAKNYNELFEIIKKKLEDEKFNILNSYVNEDEIRIYVQTENGLEELVINDN
LFANPLYEEAVHIFTKMKERDIDLKRDPVEVLEDIEKNAKKGAYIQRYKGLGEMNPSQLW
ETTMNPENRRLLKIDVSNLQTASEIFELFMGDEVEPRRDYIQAHAKDVKHLDV
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagaaaaaaattatggtgctggaaatataaaagtactaaaagggcttgaa
gctgtaagaaaacgtccaggaatgtatatcggcgatacgaatattagcggtcttcatcat
atgatttatgaagtagttgataactctatagacgaatctatggcaggttactgtgatacg
ataaatatagagcttacaagagaaggttcttgtatagttactgataatggtcgtggaatt
cctgttgatattcatcctacagaaaaaatttcagcagcaacagtagttttaactgtactt
cacgcaggtggtaaatttgataaagatacttataaagtttcaggaggacttcacggtgtt
ggagtttcggttgtaaatgctctttcaaaaaaactaattcttaacataaaaagagatgga
aatttatatcgtcaagagttttcaaaaggaataccccaaaatattttagaagctgtaaaa
actacaaatcgaacaggaactagtgttgagttttggcctgatgatgatatatttgaagta
actgaatttgataaacaaattttatcaaaaagatttaaagaattagcatatttaaatcca
agaattactataaattttaaagatcaaagagacggttttagtgaaacttatcattttgaa
ggtggtcttgaaagttttgttacagatataaacaaaagtaatccagtaagcaaagcagtt
agttttagcggtggtgaagaagatgttatagtggattttgctctactttacaatgaaaca
tatacagaaaatttactaagtttcgtaaacaatataaaaactccagatggtggaactcat
gaagcaggttttagagctgggcttacaagagctattacaaattatatagctgcaaatgct
gcagctcgtgagaaagatactaagataaccggagatgacataagagaaggacttatagct
atagttagcgtaaaagttccagaaccacaatttgaaggtcaaactaaaggaaaactcggc
tcgagttatgtaaaacctatcgttcaaaaaatgacttttgatgttttgtgtaaatatttt
gaagaaaaccctatcgaagcaaaagctataatgaataaagctcttatggctgctcgtggt
cgtgaagcagctaaaaaagcaagagatttaacacgcaaaaaagatagtttaaatagcgta
ggaacgcttcctggaaaattagctgattgtcaaagtaaagatccaagtgagagtgaaatt
tatcttgttgagggagattctgctggaggctctgcaaaacaaggtcgtgatagagcgttt
caagcgattttaccacttcgaggtaagatattaaacgtagaaaaaagtagacttgataaa
attttaaaatcagaagagataaaaaatatgataaccgcatttggatgcggaattggtgaa
gagtttgatcctgaaaaacttagatatcataagataattattatgactgatgcggacgta
gatggaagccatattcaaactttacttcttacttttttctttaggtttttaactccgatc
attgaaaatggttatgtttatctagctcagccgcctctttatagatacaaaaaaggtaaa
aaagagatctacttaaaagatgaaaaagctttgaatgaatttcttatagaaactggaatt
gaaggtgaggattttgaaggtgttggaaataaagatctgattgattatttaaagataatc
gcggcttatagaagtattttgatggatcttaaaaaacgttttaacgtactaatcgttata
agatatatgatagaaaatccggatgttatagcaaaaaattataatgaactttttgagatt
ataaagaaaaaacttgaagatgaaaaatttaatattttaaattcatacgtaaatgaagat
gagattaggatatatgttcagactgaaaatgggcttgaggaacttgttataaatgacaat
ttatttgcaaatcctctttatgaggaggctgttcatatatttacaaaaatgaaagagcgt
gatatagatctaaaaagagatccagtagaagtgcttgaagatatagaaaaaaatgctaaa
aaaggtgcttatatacaacgttacaaaggtcttggagagatgaatcctagtcaactttgg
gagacaactatgaatccagaaaatagacgacttttaaaaatagatgttagcaatcttcaa
acagctagtgaaatttttgaactctttatgggtgatgaggttgaacctagacgagattat
atacaagctcatgcaaaagatgtaaaacatctggacgtttaa
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