Campylobacter fetus subsp. venerealis cfvi03/293: CFVI03293_0089
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Entry
CFVI03293_0089 CDS
T03000
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cfv
Campylobacter fetus subsp. venerealis cfvi03/293
Brite
KEGG Orthology (KO) [BR:
cfv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfv03016
]
CFVI03293_0089 (truD)
Enzymes [BR:
cfv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CFVI03293_0089 (truD)
Transfer RNA biogenesis [BR:
cfv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFVI03293_0089 (truD)
Prokaryotic type
CFVI03293_0089 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SAM_BAF
Motif
Other DBs
NCBI-ProteinID:
AHE93443
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All DBs
Position
72747..73880
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AA seq
377 aa
AA seq
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MENTAIFKPLLGTTHSPINAHFSKNASDFVVRENPLYSFSGSGEHLVVEIQKKGMTTSEA
LTVLSRQSGAKMRDFGYAGLKDKEGMTTQFISMPAKFENEISKFSYENLKILSITKHNNK
IRIGHLKSNSFFIRLKKVLGSEALKLKEALKTIDKNGYPNYFGYQRFGRFGDNANSGFEI
LNSALNGDKSMFKKANPKLRDFLISAYQSDLFNKWLSKRVEISRFSEDFSARELEDIYKF
DKTTIKNLKSQKQFFKLFQGEVLGHYPFGKVFLCEDLEAEVAKFGARDRTSCGLIIGSKA
YESTGVAKSLEDEIFRDAYKFSSFVSGSRRFAWMWIDNLEYKYNEESAQFSISFALQKGS
YATVVLREILGRDIFEE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacagccatttttaaaccgcttttaggcactacgcattcgcctataaacgcg
cattttagtaaaaacgcaagtgattttgtagttagagaaaaccctctttatagttttagt
ggaagcggtgagcatctcgttgttgaaattcaaaaaaaaggtatgacgacttccgaagcc
cttactgttttaagcaggcaaagcggagcaaaaatgcgtgattttggttatgccgggctt
aaagataaagaggggatgacaacacaatttattagtatgccggctaaatttgaaaatgaa
atttcaaaattcagctacgaaaatttaaaaatcctaagtataacaaaacataataataaa
ataagaatcggtcacttaaaatcaaacagcttttttattcgtctcaaaaaagtcttagga
agtgaagctcttaaacttaaagaggctttaaaaactatcgataaaaacggctatccgaat
tatttcggttatcagaggttcggtagatttggagataatgcaaatagtggatttgaaatt
ttaaatagtgctttaaacggtgataaatcgatgtttaaaaaggcaaatccaaagttaaga
gattttttaatttcagcttatcagagcgatctttttaacaaatggctaagcaagagagtg
gaaattagccgttttagtgaagattttagcgccagggagcttgaagatatatataaattt
gataaaactactataaaaaatttaaaatcccaaaaacaattttttaagctttttcaaggc
gaagttttaggtcattatccttttggaaaggtgtttttatgcgaagatttagaagccgag
gttgctaaatttggagcaagagacagaacaagctgcggattgataatcggttctaaagcg
tatgaaagtacaggagttgcaaagagtttagaagatgaaatatttagagacgcttataaa
tttagttcttttgtaagcggttcaagacgatttgcttggatgtggattgataatttagaa
tataaatataatgaagaatccgcacagtttagcataagttttgcgctacaaaaaggttca
tatgcgactgttgttttgcgcgaaattttaggtagagatatttttgaagagtaa
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