Campylobacter fetus subsp. venerealis cfvi03/293: CFVI03293_0887
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Entry
CFVI03293_0887 CDS
T03000
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cfv
Campylobacter fetus subsp. venerealis cfvi03/293
Pathway
cfv03030
DNA replication
cfv03430
Mismatch repair
cfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFVI03293_0887 (dnaQ)
03430 Mismatch repair
CFVI03293_0887 (dnaQ)
03440 Homologous recombination
CFVI03293_0887 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfv03032
]
CFVI03293_0887 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cfv03400
]
CFVI03293_0887 (dnaQ)
Enzymes [BR:
cfv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFVI03293_0887 (dnaQ)
DNA replication proteins [BR:
cfv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFVI03293_0887 (dnaQ)
DNA repair and recombination proteins [BR:
cfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFVI03293_0887 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
TMP_N
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHE94199
LinkDB
All DBs
Position
complement(919406..920203)
Genome browser
AA seq
265 aa
AA seq
DB search
MEQKLENFINLLGKSSLNYYDFLQKANDISSLKEIINVKDFDDWNILGLGLVKTESGKVT
LKSKYTDFKDQVFCVVDIETSGGINSGQIIEIGALKLLDGVEIGRFESFVYAPNVPENIS
ELTGIYAADLAKAPSLANVLEKFKLFLGDSVFVAHNVKFDYDFISISLERLGFGMLLNRR
ICTIDLARRTIISQKYGLGTLKELLGISNAHHRALNDAIAAAEIFKECVKRVPWSIQSVE
DLIIFSKTAKSLKLPNTLVKAKEFS
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ttggaacaaaagttagaaaattttataaatttactcggtaaaagcagccttaattattat
gatttcttgcaaaaagcaaacgatatatcaagcttaaaagagataatcaatgtcaaagat
tttgatgattggaatattttagggcttggtttagtaaagacagagagcggaaaagttact
ttaaaaagcaaatacacggatttcaaagatcaagttttttgcgtggtagatatagaaaca
agcggcggtataaacagtggtcaaatcatagaaataggagcgctaaaactcttggacgga
gttgaaatagggcgttttgaaagttttgtttatgctccaaacgttccggaaaatatcagc
gaattaacaggaatttacgccgctgatttagctaaagcacctagtcttgcgaatgtgctt
gaaaaattcaagctgtttttaggagatagcgtatttgtcgcacataacgttaaatttgat
tatgattttataagcataagtttagaacgtcttggttttggaatgcttttaaatagacga
atttgtacgattgatttagcacgccgaacgataatttcgcaaaaatacggacttggcacg
ttaaaagagcttttaggtataagcaatgctcaccatagagctttaaatgacgctatagct
gctgctgagatatttaaagagtgtgtaaaaagagtgccttggagtattcaaagtgtcgaa
gatctcatcatctttagtaaaaccgcaaagagtttaaaacttccaaatactttagtcaag
gcaaaagaatttagttaa
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