Campylobacter fetus subsp. venerealis cfvi03/293: CFVI03293_1460
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Entry
CFVI03293_1460 CDS
T03000
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cfv
Campylobacter fetus subsp. venerealis cfvi03/293
Pathway
cfv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFVI03293_1460 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfv03021
]
CFVI03293_1460 (rho)
03019 Messenger RNA biogenesis [BR:
cfv03019
]
CFVI03293_1460 (rho)
Transcription machinery [BR:
cfv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CFVI03293_1460 (rho)
Messenger RNA biogenesis [BR:
cfv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFVI03293_1460 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
ATPase_2
AAA
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AHE94747
LinkDB
All DBs
Position
1466034..1467368
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AA seq
444 aa
AA seq
DB search
MENKDNAQSHQSSSGAKKQHTRTHIPVDGYKIEELRQLDLDSLVAIANEVGVENPREFRR
QELVFEILKAQTKQGGFILFTGILEIVGDGYGFLRATDANLSDSANDTYVSQSQIKKFAL
RVGDIITGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNEKIKLEYDP
MKLTGRVLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEMELIVLLIDERPE
EVTDMQRSVKGEVFSSTFDLPAINHVRVAELVIEKAKRSVEMGKNVVILLDSITRLARAY
NTVTPSSGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEE
FKGTGNSEIVLDRTISDRRIYPAVNILKSGTRKDELLQGPDDLGKIWAIRNIIATMDDIE
ALKFLYSKMLKTRDNKELLSIMNE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaagataatgcccaatcccaccaaagttcgtcgggtgcaaaaaaacagcac
actcgtacacacattccagttgatggatataaaatcgaagaattaagacaacttgatctt
gatagcttagtagccatagcaaatgaagtcggcgttgaaaatccacgagaatttagacgc
caagagcttgtttttgaaattttaaaggctcaaacaaagcaaggcggttttatattattt
acaggaattttagaaatagtaggtgacggatacggatttttaagagctactgatgcgaat
ttaagcgattcggcaaacgatacatacgtaagccaaagccagattaaaaaattcgctctt
agagtaggagatatcattaccggacaagtaagagaaccaagagagcaagagaaatattac
gctttattaaaaatagaagcgataaattacaaatccatagcagaagcaaaagaaagacca
ctttttgacaatctaactccgctttttccaaatgaaaaaataaaactcgaatatgaccct
atgaaactaacagggcgtgttttggatctatttactcctattgggaaaggtcaaagaggt
cttatagtagctcctccgagaacaggtaaaacagagcttatgaaagagcttgctcacggt
ataacaagaaatcatcccgagatggaactaatagttcttcttatagatgagcgtccagaa
gaggttaccgatatgcaacgctcagtaaaaggagaggtatttagctctacttttgacctg
ccggctataaatcacgtaagagttgccgagctagtcatagaaaaggcaaaacgttcagta
gagatggggaaaaacgtggttatacttcttgatagcataactcgtcttgcgcgtgcttat
aatacggtcactcctagtagcggaaaagtactaagcggaggagtagatgcaaacgcgctg
cataagccaaaaagattttttggagcagcaagaaatatagaaaacggtggaagcttaacc
atagtcgcaacagcccttatagataccggctcacgtatggatgatgtgatatttgaagag
tttaaaggtaccggaaatagtgaaatagtgcttgatagaactatcagcgatagaagaatt
tatccggctgtaaatatacttaaatccggaacaagaaaagatgaacttcttcaaggacca
gatgatcttggtaaaatatgggctataagaaatattatcgcgacaatggatgatatagaa
gcacttaaatttttatattcaaaaatgttaaaaacgagagataacaaagaacttcttagt
ataatgaacgaatag
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