Campylobacter fetus subsp. venerealis cfvi03/293: CFVI03293_1775
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Entry
CFVI03293_1775 CDS
T03000
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cfv
Campylobacter fetus subsp. venerealis cfvi03/293
Pathway
cfv03410
Base excision repair
cfv03430
Mismatch repair
cfv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFVI03293_1775 (recJ)
03430 Mismatch repair
CFVI03293_1775 (recJ)
03440 Homologous recombination
CFVI03293_1775 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfv03400
]
CFVI03293_1775 (recJ)
DNA repair and recombination proteins [BR:
cfv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CFVI03293_1775 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFVI03293_1775 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFVI03293_1775 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AHE95037
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Position
1773174..1774766
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AA seq
530 aa
AA seq
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MLDKTEIRNLLNKRFSNDLHKKLSEIPLPCELKDTYKAAERIKTAIQNNELIAIVGDYDV
DGVVSTAIMAEFLTDMSTDFIIRIPNRFKDGYGLNSDIVNELESVALIITVDNGISANEA
ADLCAKKGIDLIITDHHMPPQILPQAYAIINPKQPECTFPNIEICGAQVAWYLVGALKEV
CSLKNYDMGKFIDLLALAIIADMMELRDLNRILVRLGITRINSSKRACFEAIKCFYGKDK
FEFDDISFLIAPLINSAGRMDDASVSFKFLRSKTIDEANSYLDMITCFNNSRKEQEKALF
ESSIKDVNDNEDIIVTWGNEWHEGVIGIVASRLAKRYKKPAIVFSIDGCRAKGSARSVGK
FDILALIASQEKLLCGFGGHKGAAGLVIETNNLDEFKHAVNNSCFLQDLYDFSGSDEVLG
EIDHNAIDYELLEILEYFEPYGQRNPRPLFELKSAKVKNTKFIGKEENHLKLILQKGGKS
YEAIFFNYDYTPHVGDNIDLLVSVSKNSFRGLITPQLLIKEIYELKNQEK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgttagataaaaccgagatcaggaatctgcttaataaaaggtttagtaacgacttacat
aaaaaactttcagagattcctttgccttgcgaactcaaagatacttataaagctgcagag
cgtatcaaaactgcgatacaaaacaatgagcttatagctatagttggagattatgatgta
gatggagttgttagtactgctataatggctgagtttttaacagatatgagtacggatttt
ataatacgaattccaaatagattcaaagacggttacggtcttaactcagatatagttaat
gaacttgaaagcgttgcactcataataacagtagataacggtataagtgcaaatgaagca
gctgatctatgcgccaaaaaaggtatagatcttatcatcacagatcatcatatgcctccg
caaattttgcctcaagcctacgcgataataaatccaaaacagccagaatgcacatttcca
aatattgaaatttgcggtgctcaagtagcatggtatcttgttggagcgttaaaagaggtt
tgcagtctaaaaaattacgatatgggcaaattcattgatcttttagcgctagcaattatc
gctgatatgatggagttgagagatttaaataggatactagttagacttggtataactcga
attaactctagtaaaagagcatgttttgaagctataaaatgtttttacggaaaagataaa
tttgaatttgacgatataagctttcttatagctccacttataaactcggccggaagaatg
gatgatgcaagcgtgtcttttaaatttttaagaagtaaaactatagatgaagcaaacagt
tatcttgatatgataacctgttttaataattcaagaaaagagcaagaaaaagcattattc
gaatcgtctataaaagatgtaaacgataacgaagatatcatagttacttggggaaatgag
tggcacgagggcgtaataggaatagttgctagcagacttgcaaaaagatataaaaagccc
gcaattgtatttagcattgatggctgcagagcaaaaggaagtgctagaagcgtaggtaaa
tttgatatattggcccttatagcatcacaagaaaaacttctttgcggatttggcggacat
aaaggcgcggctggattagttatagaaactaacaatctagacgagtttaaacatgccgta
aataactcctgctttttacaagatttatatgattttagtggaagcgacgaggttttaggc
gaaattgatcacaatgcgattgattatgagcttttggagattttagagtattttgaacca
tacggtcaaagaaatccaagaccgttatttgagctaaaaagtgcaaaagtaaaaaatacc
aaatttataggcaaagaagaaaatcatctaaaactcatacttcaaaaaggcggcaaatcg
tatgaagcaatattttttaactacgactatacgcctcatgtcggagataatatagatctt
ttagtctccgtatcaaaaaactcatttagaggtcttatcacgcctcaacttttaataaaa
gagatatatgaactaaagaatcaggagaaataa
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