Campylobacter fetus subsp. venerealis 97/608: CFV97608_0178
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Entry
CFV97608_0178 CDS
T03351
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfx
Campylobacter fetus subsp. venerealis 97/608
Brite
KEGG Orthology (KO) [BR:
cfx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfx03032
]
CFV97608_0178 (topA)
03400 DNA repair and recombination proteins [BR:
cfx03400
]
CFV97608_0178 (topA)
Enzymes [BR:
cfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFV97608_0178 (topA)
DNA replication proteins [BR:
cfx03032
]
Prokaryotic type
DNA Topoisomerases
CFV97608_0178 (topA)
DNA repair and recombination proteins [BR:
cfx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFV97608_0178 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Zn_ribbon_19
DNA_ligase_ZBD
Zn_ribbon_PaaD
Zn_ribbon_IS1595
Zn_ribbon_ACC
DUF1272
Toprim_4
Zn_ribbon_8
Zn_ribbon_TFIIB
ADK_lid
DUF7479
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AIR79847
LinkDB
All DBs
Position
158776..160860
Genome browser
AA seq
694 aa
AA seq
DB search
MSKLIIVESPAKAKTIKNFLGSEYKVIASKGHIRDLPKSSFGIKIEDDKFTPEYRVSSDH
SAIVKEIKDLAKNADTIYLATDEDREGEAIAYHIAAAIGKKPEMLPRIVFHEITKSAIQN
ALENPRSLNMDSVNAQQARRLLDRIVGYKLSPLLNSKIQRGLSAGRVQSSALKILVDRER
EIRNFKPIEYFSIDTKFKKDLEAELVEFEGSKIEKLTITNKDRAKFIVDKIKDESFSVAN
VESKERKTSPQPPFMTSTLQQSASNRLGFSPKKTMMLAQNLYEGVQTNNGFMGAITYMRT
DSLNLAKEAISAARDLIKEQFGDKYLPKSANFYTTKNKGAQEAHEAIRPTNLSFTPTEAA
KFLEKDLLKLYTLIYNRFLACQMSASVSETQNIFINSKSSIFKISGRKLTFDGFYRVYGD
LDKDRILPNLNVGDKMELESLSSQSHFTEPPSRYSEAGLVKKLESLGIGRPSTYAPTISL
LTSRDYVKVDKKQLIPNEIAFNITSMLEEHFNDIVDSDFTSKMEEKLDDIAENKADWQEV
LSKFYHPFMQKIDDGKKNIKSQKVTEPIGEKCPECGGELVKRKGRFGEFIACLNFPKCKY
SRNLKNEAKIEKKEPQKIGVACPQCGGDIVERFSKKGKFFGCANYPKCNFISKYQPTDQK
CPQCGEMMVYKELKKGNFYECSACKFKKEGNNNE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttaattatcgtagaatctccagcgaaagcaaaaactataaaaaattttttg
ggtagcgagtataaagttatagctagtaaaggtcacattagagatcttccaaagtctagc
ttcggcataaaaatagaagatgataaattcacgccagagtacagagtaagtagcgatcac
agcgctatagtaaaagaaataaaagatctagcaaagaatgcagataccatatatctagct
accgatgaggatagagagggcgaagctatagcataccatatagcagccgcaataggtaaa
aaacctgagatgcttccaagaattgtatttcacgagataacaaaatctgccatacaaaat
gcattagaaaatccgcgtagtttaaatatggatagcgtaaatgctcaacaagcaagaaga
cttttagataggatagtcggttataaattaagcccgcttttaaactcaaaaatccaaaga
ggtcttagtgcggggcgcgttcagagttcggctttgaagatattagtagatagagagcgc
gaaataagaaatttcaaacctatagaatattttagcatagatactaaatttaaaaaagat
ttagaagctgaactggttgagtttgagggttctaagatagaaaagcttactataacaaac
aaagatcgtgcaaaatttatagttgataaaataaaagatgagagttttagtgtcgcaaac
gtagaaagcaaagagcgaaagacaagtccgcagcctccgtttatgacttctactttgcag
caaagtgcgtcaaatagactaggatttagccccaaaaaaactatgatgttagcgcaaaac
ttatatgaaggtgtacagacaaataacggttttatgggcgctataacatatatgagaaca
gatagcttaaatttagctaaagaagctataagtgcagctagagacctgattaaagagcag
ttcggcgataaatatcttccaaaatctgcaaatttttacactacaaaaaacaaaggagct
caagaagctcatgaagctattcgtcctacaaatttaagctttactccgacagaggcggct
aagtttttagaaaaagatctgctaaaactctatactcttatatataatagatttttggct
tgtcaaatgtctgcaagcgtatcagaaactcaaaatatatttataaacagtaaaagcagt
atttttaaaatttcgggcagaaagcttacgtttgatggattttacagagtttatggggat
cttgataaagataggattcttcctaatttaaacgtaggcgataaaatggagcttgaaagc
ttaagcagccaaagtcattttaccgagccgccatcaagatattcagaagccggtttggta
aaaaaacttgagagtcttggtataggcagaccaagtacgtatgctccgactatttctttg
cttactagcagagattacgtaaaagtagataaaaaacagcttattccaaacgagatagca
tttaatataactagtatgcttgaagagcattttaatgatatagtagatagcgattttacc
tctaaaatggaagagaaacttgatgatatagcagaaaataaagcagattggcaagaggtt
ttatctaaattctatcatccttttatgcaaaaaatagatgacggtaaaaaaaatataaag
agtcaaaaagtaaccgagcccataggtgaaaagtgtcccgagtgcggcggagagcttgta
aagcgaaaaggaagattcggcgaatttatcgcttgtttgaattttccaaaatgtaaatat
tctagaaatttaaaaaatgaagctaaaattgaaaaaaaagagccgcaaaaaatcggtgta
gcatgtcctcaatgcggcggagatatagttgagagatttagtaaaaaaggtaaatttttt
gggtgcgcaaactatccaaaatgtaactttataagcaaataccaacctacagatcaaaaa
tgcccgcaatgtggtgaaatgatggtttataaagagcttaagaaaggcaatttttacgaa
tgttctgcttgtaaatttaaaaaagaagggaataataatgagtaa
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