Campylobacter fetus subsp. venerealis 97/608: CFV97608_1021
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Entry
CFV97608_1021 CDS
T03351
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfx
Campylobacter fetus subsp. venerealis 97/608
Pathway
cfx03420
Nucleotide excision repair
cfx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFV97608_1021 (rep)
03430 Mismatch repair
CFV97608_1021 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfx03400
]
CFV97608_1021 (rep)
Enzymes [BR:
cfx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFV97608_1021 (rep)
DNA repair and recombination proteins [BR:
cfx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFV97608_1021 (rep)
MMR (mismatch excision repair)
Other MMR factors
CFV97608_1021 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_12
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIR80645
LinkDB
All DBs
Position
complement(1011899..1013938)
Genome browser
AA seq
679 aa
AA seq
DB search
MALSKLNREQYTAATAPTGYNLVIASAGTGKTSTIVARIAHLLNLGMKPERILLLTFTNK
AASEMIDRLSNYFSAKTVGSIMAGTFHSVSNSLLKKLNKGVILKQPSELKTLLKSLVERR
EFHRIGEVKAYSGAYLYDVYSLFCNSCVNDESFAQWFSENYSDQTVYAEVYEDILREFEE
QKSRFNYADFNDLLIKMRNELKKGAKVFYDEILVDEYQDTNSLQGSLIDSFNAKSLFCVG
DFDQSIYAFNGANIDIIGSFTQRYKDAKVYSLNVNYRSSAKILSLANKVIAQNPRLYPKE
LTVSRIGNFKSPSLLIYDELFLQYENISEIILNSHYKKDDIAIIFRNNSSADGLEVALKE
QGISCKRKGGVSFFESREIKALIDLIGIYINPKDIMAFIHVFEYARGVGNASAKEIFDTL
LALGDRSIVKGLLNPDKSVKVFERSKKNHQLGLFDDFSEFMDSARFTSLGLSKEFMENPV
LNYSNLNTNGAIFLYELYKLLMQIQGKTNSYEVVNSVINSGVYSIIVDFLATKRATLKNG
NVDANLKDEAKDRIYAKSKVLLEMSKRHNYCDVFYNFLTLGRTEMSEGEGVSLLTVHASK
GLEFSLVFVVDLAQNRFPNLKLMGMGGSLEEERRLFYVAVTRAKDELYLSYAKYDKIRKI
DYKPSCFLEEAGIVKRFGI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttagcaaactaaaccgcgaacaatacacagccgcaaccgctccaacggggtat
aatctagtaatagctagcgcaggcaccggaaaaactagtacgattgtggctcgcatagct
catcttttaaatttaggtatgaaaccagagcggatactgctacttacttttacaaataaa
gccgcaagtgaaatgatagatagattatcaaattattttagtgcaaaaacggtcggttct
atcatggcagggacttttcattctgtttcaaattcgcttttaaaaaagttaaataaaggc
gttatcttaaaacaaccaagcgagctgaaaactcttttaaaaagcttggtagaaagacgc
gaatttcataggataggtgaagtaaaagcttacagcggcgcatatctttatgatgtttat
tctcttttttgcaattcatgtgtgaatgatgaaagttttgcccagtggtttagtgaaaat
tatagcgatcagactgtttatgctgaggtttatgaggatattttaagagaatttgaggag
caaaaatcacgttttaattatgcggattttaatgatttgcttattaaaatgagaaacgag
ctaaaaaagggcgcaaaggtattttatgatgaaattttagtagatgagtatcaagataca
aactcgcttcaaggctctcttatagattcttttaatgcaaaaagcttattttgcgtggga
gactttgatcagagtatttatgcttttaatggtgcaaatattgatataataggaagtttc
actcagagatataaagatgcgaaagtttattctttaaatgtaaattatagaagtagcgca
aagatattatctttggcaaataaagtaatagcgcaaaatcctagactatatccaaaagag
cttacggttagcagaatcggaaattttaaatctccaagtttgctcatttatgatgagttg
tttttgcagtatgaaaatatatctgagattattttaaattctcattataaaaaagacgat
atcgcgataatttttcgcaataattcgagcgcggacggacttgaagtcgctttgaaagag
caaggaattagttgtaaaagaaaaggcggcgttagcttttttgaatcacgcgagataaaa
gcacttatagatttgatcggaatttatataaatccaaaagatattatggcgtttatccat
gtttttgaatatgctaggggagtcggaaacgcctctgcaaaggagatatttgatactctt
ttggctttgggtgataggagcattgtaaaaggtcttttaaatccggataaatcagttaag
gtttttgaacgttcaaaaaagaatcatcagctaggactttttgatgattttagtgagttt
atggatagcgctagatttactagtcttggtctaagtaaagaatttatggaaaatccggtt
ttgaattactcgaatttaaataccaacggagcgatttttttatacgaactttataaatta
ttgatgcagatacaaggaaaaacaaattcatacgaagtggttaattcggtgataaactca
ggagtgtattctattattgttgattttttagctactaaaagagctactttaaaaaacgga
aatgtcgatgcaaatttaaaagatgaagcaaaggatagaatttatgcaaaatcaaaagtg
cttttagagatgagcaaacgtcataattactgtgatgtattttataattttttaactctt
ggaagaactgaaatgagtgaaggtgagggcgtaagtttattaacagtgcatgctagcaaa
ggtcttgagtttagcttggtttttgtagtagatctagctcaaaatcgttttccaaattta
aaacttatggggatgggcgggagtcttgaagaagaaagaagacttttttatgttgcggtt
actagggccaaagatgagctatatctaagctatgcaaagtacgacaaaatcagaaaaata
gactacaagccaagctgttttttagaagaagccgggattgtgaaacgttttggaatttaa
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