Campylobacter fetus subsp. venerealis 97/608: CFV97608_1408
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Entry
CFV97608_1408 CDS
T03351
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfx
Campylobacter fetus subsp. venerealis 97/608
Pathway
cfx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFV97608_1408 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfx03019
]
CFV97608_1408 (pnp)
03016 Transfer RNA biogenesis [BR:
cfx03016
]
CFV97608_1408 (pnp)
Enzymes [BR:
cfx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFV97608_1408 (pnp)
Messenger RNA biogenesis [BR:
cfx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFV97608_1408 (pnp)
Transfer RNA biogenesis [BR:
cfx03016
]
Prokaryotic type
tRNA degradation factors
CFV97608_1408 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
AIR81023
LinkDB
All DBs
Position
complement(1370797..1372983)
Genome browser
AA seq
728 aa
AA seq
DB search
MQCSIEVNNQIEIFDLNKVAKQAAGAVLMRVKNTVVLAAVAREDAQVEEDFLPLTVQYIE
KQYAAGRIPGGYVKRETKPGDFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSSDPEVD
LQVVSLNAASVALYLSDIPVNSPVCGVRVGHINGKFVINPSNSELKNSALDLYVAGVKDE
LLMIEMRSLPNEQNEIVPVIAIDPMMDPSLNEGFVSRQKMNEFSEDLMIDAIKLATEAIL
KGSNAYEEAFRNYKKETANLEYKPEIENENVAIYINEFYKEDVKAAINQMAKSERASELS
KIAKQIALSEVAQKEGWDEALISNILGKYKKKLVRTGIIKDKKRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVTTLGTDNDAQMSEYLTEKNAVADKFMFNYNFPGFSVGE
ASPLKAPGRRELGHGNLAKRALYPSIDLNSPYSLRVVSEILESNGSSSMASVCGGSLSLR
AAGVETIKLVAGVAMGLVFEGDEHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISLDVLKEALYQAKEARDHILNLMVKADEEIVVNEDVLPKLELFSVDPSKIVDIIGQA
GKTIKEIIEKFEVSIDLDRDKGEVKIAGGERQKVEAAKDYIIQITQKEQRSGGFRNKREY
KNVTPFNIGDEFEGEIKKMAAFGAFISLRDGVDGLLHISKIVSPLKEGDTIKVKVSDIKG
GKISLDLN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgttcaatagaagtaaataatcaaattgaaatttttgatcttaataaggttgcc
aaacaagcagccggcgcagtgttaatgcgtgtaaaaaatacagttgtattagccgcggtt
gctagagaagatgctcaagtagaagaggattttttacctcttaccgtgcagtatatagaa
aaacaatacgccgctggtagaataccaggaggatatgtcaaaagagagactaaaccagga
gattttgagacattaacaagccgtattatagatagaagtttaagacctttattccctaaa
ggctatgcatatccgactcagattgtcgtaatggttttaagtagcgatccagaagtggat
ttgcaagtagtgtcgctaaatgctgcgagtgtagctttatatcttagtgatattccggtt
aacagtccggtttgcggtgttagggtagggcatataaacggtaaatttgttataaatcca
agcaattcagagctaaaaaactctgctcttgatctttacgtggcaggcgtaaaagatgaa
cttcttatgatagaaatgagaagtttacccaatgaacaaaatgaaattgtaccagtcatc
gctatagatcctatgatggatcctagtttaaatgaaggtttcgtttcaagacaaaaaatg
aatgaatttagtgaagatcttatgatagatgctataaaattagctacagaagctatatta
aaaggaagcaacgcatatgaagaggcgtttcgtaactacaaaaaagagactgcaaattta
gagtacaagccagagatagaaaatgaaaatgttgcgatatatataaatgaattttacaaa
gaagatgtaaaagcggctataaatcaaatggctaaaagcgaaagagcgagtgagctttct
aaaatagctaaacaaatagctcttagtgaagttgctcaaaaagagggctgggatgaagct
cttatctcgaatatacttggaaaatataagaaaaagttagttagaacaggtattataaaa
gataaaaaaagagccgacggaagaggtctaaaagatgttaggccgatcagtatagagacg
aatattttgccaaatgcacatggaagttgtctatttacccgcggtcaaactcaagctctt
gttgtaactactttaggtaccgataatgatgctcaaatgagtgagtacttgacagaaaaa
aatgcagttgccgataaatttatgtttaattataattttcctggatttagcgtaggtgag
gcaagtcctttaaaggctcctggacgacgcgagttaggacatggaaatttagcaaaaaga
gctctttatccaagtatagatttaaatagtccgtactcgttaagagttgttagcgaaatt
ttagaaagtaacggttcaagttctatggctagtgtatgtggcggctctttgtcacttaga
gcagcaggagtcgaaacgatcaagcttgtagccggagtagcgatggggcttgtatttgaa
ggtgatgagcacgctgttttaacagatataatggggcttgaagaccacgatggagatatg
gacttcaaggtcgcaggctcaaaagacggcatcaccgctcttcagatggatatcaaatta
ggcggaattagtttagatgtattaaaagaagcgctataccaagcaaaagaagctagagat
catattttaaatttaatggttaaagcagatgaagaaatagtcgtgaatgaggatgtttta
ccaaagttagagttatttagcgtagatcctagtaaaatagttgatataataggacaggcc
ggaaaaaccataaaagagattatagaaaaatttgaagttagcatagatcttgacagagat
aaaggcgaagtaaagatagccgggggagagagacaaaaggtagaagctgctaaagattat
attatacaaattacgcaaaaagagcagagaagcggcggttttaggaacaaaagagagtat
aaaaacgtaactccttttaacataggtgatgagtttgaaggcgaaattaaaaaaatggct
gcttttggtgcatttatatctttaagagatggagttgacgggcttttacatatttcaaaa
atagtttcacctttaaaagagggtgatacgataaaggtaaaagtttcagatattaaaggc
ggaaaaatatcattggatcttaattaa
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