Corynebacterium freneyi: I6L56_03440
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Entry
I6L56_03440 CDS
T08562
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cfy
Corynebacterium freneyi
Pathway
cfy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I6L56_03440 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfy03400
]
I6L56_03440 (uvrA)
DNA repair and recombination proteins [BR:
cfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6L56_03440 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I6L56_03440 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
AAA_33
AAA_16
AAA_22
nSTAND1
AAA_23
nSTAND3
NACHT
AAA_25
DnaJ_CXXCXGXG
ScfRs
nSTAND6
Viral_helicase1
NTPase_1
CCDC24
cobW
Motif
Other DBs
NCBI-ProteinID:
QXA53440
LinkDB
All DBs
Position
complement(794438..797293)
Genome browser
AA seq
951 aa
AA seq
DB search
MAERLIVRGAREHNLKGVDLDLPRDKMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMEKPEVELIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFARTGTAH
CPTCGEVISSQTPQQIVDQVLAMPEGTKFQVLAPVVRTRKGEFVDLFAELASEGYARVVV
DGEMHRLTDPPKLEKQVKHDIDVVVDRLQVKATQKQRLADSVETALRLADGVVVIDAVGL
DDDDPNRMRRFSENISCPNGHRIDIEELEPRSFSFNSPYGACPSCDGLGTKLEVDEDLIV
PDPSKPVTEAIEPWNRTLNKKYFEKLVTGLADAMGFDPHTPLQDLTKAQRKALMRGSKHK
VSVRYRNRYGRTRQYTAPFEGVMPYLHRKLEQADSESQKERYQGYMREVPCSACNGARLR
PEILSVTLEAEGFGEKSIAGLTDMSVANCSAFLDALTLGAREEMIAGRVLREVQARLRFL
LDVGLDYLSLARSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNHRLIQT
LKKLRDLGNTLIVVEHDEDTIREGDWLVDIGPRAGEYGGEIVYSGTPDGIFDAADSITGE
YLLGKRKILPPEKRRPVDFDRLVTVRGGRENNLKNVDVTFPLGLLTCVTGVSGSGKSTLV
NEILAKVMANELNGARQVPGRHTRVEGLDQLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAETQESKVRGYKPGRFSFNVKGGRCEACRGDGTLKIEMNFLPDVYVPCEVCDGARY
NRETLEVQYKGKNIAEVLDMPISEAAEFFEPIQSIARYLNTLVDVGLGYVRLGQAATTLS
GGEAQRVKLAAELQKRSNGRTVYILDEPTTGLHFEDIRKLMLVLQGLVDKGNTVIVIEHN
LDVIKSADWIIDMGPEGGDGGGTVVTQGTPEDVAVVEASHTGHYLKPLLEA
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
ttggccgaacggctcatcgtccgtggtgcccgggagcacaacctcaagggcgtcgacctc
gacctgccccgcgacaagatggtggttttcaccggattgtcggggtcgggcaaatcgtcg
ttggcgttcgacacgatcttcgcggaggggcagcgcaggtacgtcgagtcgctgagttcc
tacgcgcgcatgttcctggggcagatggaaaagcccgaggtcgagctgatcgagggcctg
tcgccggcggtgtccatcgaccagaagtccacgaaccgcaacccgcggtcgacggtgggc
acgatcaccgaggtctacgactacctgcgcctgttgttcgcgcgcacgggcacggcgcat
tgcccgacctgcggcgaggtcatttcgtcgcagacgccgcagcagatcgtcgaccaggtg
ctggcgatgccggagggcacgaagttccaggtgctggcgccggtggtgcgcacccgcaag
ggcgagttcgtggacctgttcgccgagctggcctccgaggggtacgcgcgcgtggtcgtc
gacggcgagatgcaccggctgacggatccgccgaagctggagaagcaggtcaagcacgac
atcgacgtcgtggtggaccggttgcaggtcaaggcgacgcagaagcagcgtctggcggat
tccgtggagacggcgttgcggctggccgacggcgtcgtcgtcatcgacgcggtcgggctt
gacgacgacgacccgaatcgcatgcggcgtttttccgagaacatctcgtgcccgaacggc
caccgcatcgacatcgaggagctcgagccgcggtcgttttcgttcaactccccgtacggc
gcctgcccgtcctgcgatggtctgggcacgaagctggaggtcgacgaggacctcatcgtg
ccggacccgtcgaagccggtgaccgaggcgatcgagccgtggaaccggacgctgaacaag
aagtacttcgaaaagctcgtcaccgggttggccgacgccatgggcttcgacccgcacacg
ccgctgcaggatctgacgaaggcgcagcgcaaggccctgatgcgcgggtcgaagcacaag
gtcagcgtccgataccgcaaccgctacggccgaacccggcagtacaccgcgccgttcgag
ggcgtcatgccctacctgcaccgcaagttggagcaggcggacagcgagtcccagaaggag
cgctaccagggctacatgcgcgaggtcccgtgttcggcgtgcaacggcgcccgcctgcgc
ccggagatcctgtccgtgacgttggaggcggagggcttcggagagaagtcgatcgccggc
ctgacggacatgtcggtggcgaattgttcggcgttcctcgatgcgttgaccctgggtgcg
cgcgaggagatgatcgccggccgggtgttgcgcgaggtgcaggcacggctgcggttcctg
ctcgacgtcggcctggattacctgtcgctggcccgctccgccggaacgctgtccggcggc
gaagcccagcgcattcgcctggccacccaaatcggctccggcctggccggcgtcctctac
gtcctcgacgagccgtcgatcggcctgcaccagcgggacaatcaccgtctgatccagacg
ttgaagaagctgcgggatctgggcaacacgctcatcgtcgtcgagcatgacgaggacacg
atccgggagggcgactggctcgtcgacatcggaccacgcgccggcgagtacggcggcgag
atcgtctactcggggacgccggacggaattttcgacgccgccgattccatcaccggcgag
tacctgttgggcaagcggaagatcctgccgccggagaagcgtcgcccggtcgatttcgat
cggttggtgacggtgcgcggcgggcgcgagaacaacctgaagaacgtcgacgtcaccttc
ccgctgggcctgttgacctgcgtcacgggtgtgtcggggtcgggcaagtcgacgttggtc
aacgagattctggccaaggtcatggccaacgagctcaacggcgcccgccaggtgccgggg
cggcatacccgcgtcgaagggctcgatcagctggacaagctcgtccaggtcgatcagtct
ccgatcggtcgtacgccacggtcgaatccggcgacgtacacgggcgtgttcgacaagatc
cgcacgcttttcgccgaaacgcaggagtcgaaggtgcgcggctacaagccggggcgcttc
agcttcaacgtcaagggcggccggtgcgaggcgtgccgcggcgacggcacgttgaagatc
gagatgaacttccttcccgacgtctacgtcccgtgcgaggtctgcgacggcgcccgctac
aaccgcgagacgctcgaggtgcagtacaagggcaagaacatcgccgaggtgctggacatg
ccgatctcggaggcggcggagttcttcgagccgatccagtccatcgcccggtacctgaac
acgttggtcgacgtcggtctgggctacgttcgcctggggcaggcggcgacgaccttgtcc
ggtggtgaggcgcagcgcgtgaagctggcggccgagttgcagaagcggtcgaacggtcgg
acggtgtacatcctcgacgagccgacgacgggcctgcatttcgaggacattcgcaagctc
atgctcgtgttgcagggcctggtggacaagggcaacacggtcatcgtcatcgagcacaat
ctggacgtgatcaagtccgctgactggatcatcgacatggggcccgagggcggcgacggc
ggcggcaccgtggtgacgcagggcacgccggaggacgtcgccgtggtcgaagcgtctcac
acgggtcactacctcaagccgttgctggaggcctag
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