Corynebacterium freneyi: I6L56_04000
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Entry
I6L56_04000 CDS
T08562
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cfy
Corynebacterium freneyi
Pathway
cfy00470
D-Amino acid metabolism
cfy00550
Peptidoglycan biosynthesis
cfy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I6L56_04000 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I6L56_04000 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfy01011
]
I6L56_04000 (murD)
Enzymes [BR:
cfy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
I6L56_04000 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfy01011
]
Precursor biosynthesis
Amino acid ligase
I6L56_04000 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
CbiA
Motif
Other DBs
NCBI-ProteinID:
QXA53539
LinkDB
All DBs
Position
complement(933611..935083)
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AA seq
490 aa
AA seq
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MTAAGAATDLVALVRSGPVLVTGAGVSGEGAIKLLKDLGCPGIRLVDDSPERGRPMADSH
GVDWCTSDAARGLLSDAAAVVTSPGWRPDTPLLVAAADAGAPVVGDVAVAFAGDRAGVWG
APRTWLVVTGTNGKTTTTAMLAAMLGDRGAAVGNIGVALHDALTAERRVDVLAAELSSFQ
LHWAPGLRPDAGALLNLAEDHIDWHGSFEAYGADKARALTGGVAVFGLDDDEVVAHVRAL
ADAGQLAPAAVGFTIGEPAEGQIGVRDGRIIDRAFGDRATDEPHEGTELGGVDIAPIEGI
SPPGPAGVLDALAATALARSIGVRAVDIAEALAGFTVRAHRGQVVHSAGGVDWIDDSKAT
NPHAADAALRGHESVVWVAGGQLKGADVTTLIADHAHRMRAAVVLGVDGPVIAGALAAAS
PGMPVTVIGETDPASAMEQACSAAAGAAQEGDVVLLAPAAASLDMFTGMAQRGDFFADAA
RAATREGDRR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcgggtgcggccaccgacctcgtggcattggtgcgttccggcccggtgttg
gtcaccggtgcgggcgtgtccggggagggggcgatcaagcttctgaaggacctggggtgc
cccgggatccgcctcgtcgacgattccccggagcggggccgacccatggccgactcgcac
ggcgtcgattggtgcacgtcggatgcggctcggggtttgctttccgacgccgccgcggtg
gtcacctcgcccgggtggcggccggacacgccgttgctcgtcgccgcagccgatgccggt
gcgccggtcgtcggcgacgtggcggtcgccttcgccggtgatcgagccggcgtgtggggg
gcgccccgcacgtggcttgtggtcacgggcaccaacggcaagacgacgaccaccgcgatg
ctggccgccatgctcggcgaccgtggcgcggcggtgggcaacatcggcgtggcgctgcat
gatgcgctcacggccgaacgtcgggtcgacgtcctcgccgccgaattgtcgagcttccag
ctgcattgggctccgggcctgcgtccggacgccggtgcgctgctcaacctcgccgaggat
cacatcgattggcacgggtccttcgaggcttacggtgccgacaaggcgcgtgccttgacc
ggtggggtcgccgtcttcggtctcgacgacgacgaggtcgtcgcgcacgtgcgggcgctg
gccgatgccgggcagcttgcgccggcggcggtcgggttcaccatcggtgagccggctgag
gggcagatcggcgtgcgcgacgggcgcatcatcgaccgcgccttcggcgaccgcgccacc
gacgaaccgcacgagggcaccgaactcggcggcgtggacatcgcgccgatcgagggcatt
tcgcccccggggccggccggcgtgctcgatgcgctggcggccaccgcgctggcgcgctcc
atcggggtgcgcgccgtcgacatcgccgaggcgttggccggcttcaccgtccgtgcgcac
cgcggccaggtcgtccattcggccggcggcgtcgactggatcgacgattcgaaggccaca
aacccgcacgccgccgacgccgccctgcgcggccacgagtcggtcgtgtgggtcgccggc
ggccagctcaagggcgccgacgtgacgacgctcatcgccgatcacgcgcaccggatgcgt
gcggcggtcgttctcggcgtcgatggtccggtcattgccggggcgctcgccgcggcgtcg
ccgggcatgccggtgacggtgatcggggagaccgatcccgcctcggcgatggaacaggcc
tgctccgccgcagcaggtgccgcgcaggagggcgacgtggtgctgctggcgccggccgcc
gcgagcctggacatgttcaccggaatggcccagcgcggcgatttcttcgccgatgccgcc
cgcgccgccacccgcgagggtgaccgtcgatga
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