Corynebacterium freneyi: I6L56_09460
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Entry
I6L56_09460 CDS
T08562
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfy
Corynebacterium freneyi
Brite
KEGG Orthology (KO) [BR:
cfy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfy03032
]
I6L56_09460 (topA)
03400 DNA repair and recombination proteins [BR:
cfy03400
]
I6L56_09460 (topA)
Enzymes [BR:
cfy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I6L56_09460 (topA)
DNA replication proteins [BR:
cfy03032
]
Prokaryotic type
DNA Topoisomerases
I6L56_09460 (topA)
DNA repair and recombination proteins [BR:
cfy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I6L56_09460 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QXA52296
LinkDB
All DBs
Position
2154069..2157059
Genome browser
AA seq
996 aa
AA seq
DB search
MADDKAKKRLVIVESATKARKIQPYLGDDYIVEASVGHIRDLPRGAADIPAKYKKEPWAR
LGVDVDHGFQPLYLVSPDKKKKVTELKRLLAGVDELYLATDPDREGEAIAWHLLEVLKPK
VPVRRMVFHEITKPAILEAANNTRELDQNLVDAQEARRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFISAGYWDLGATLDTGSEPVDSTQPRMFDARLTAVEGK
RVAAGRDFDDRGQLKKPEGVTVLREADARSLADGLTGATLSVASVEEKPYTRRPYPPFMT
STLQQEAGRKLHFTSERTMRIAQRLYENGHITYMRTDSTTLSKSGIEAARRQARDLYGPE
YVADAPRQYQRKVKNSQEAHEAIRPAGERFATPGELAGALDAEEFKLYELIWQRTVASQM
SDARGTSMKVVVAGTSATDGGAREVELSATGRTITFPGFLKAYVEVSQLGDGRNVADNAE
RRLPRLETGQSLGVDSVTPEGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDR
GYVYSRGNALVPSWVAFAVVGLMEDSFADLVNYDFTSDLEDELDEIAAGSEDRTRWLTGF
YFGDSEEHGSGGADAIAARGGLKNIIDVNLEAIDARRVNSLHVFDDADGNPIVVRVGRYG
PYLERVRPGAGESGADLVQRANVPESMTPDELDLETAEKLLAMPQGGRELGLNPDNGRMI
VAKDGRYGPYVTEIVTDEEKAGVEVKAEQIVAEERAAEDKQRAADGMRKKNWETKTAANQ
KAKRIAAIVEETLKPKTASLFASMEPSTVTLEEALKLLSLPREVGVDPTDGEVITAQNGR
YGPYLKKGSDSRSLASEEQLFTVTLDEARRIYAEPKRRGRAAAKPPLKQLGDNDVSGKPM
TVKDGRFGPYVTDGTTNASLRKGDNPETLTDARANELLSERRAKEAATGGPGAKKTAKRS
TKKTTKKTAKKATKKSTKKTAKKTTKKTAKKTTKKS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacgacaaagcaaagaagcgactcgtcatcgtcgagtcggcgaccaaggcacgg
aagatccagccgtacctgggcgacgactacatcgtcgaagcttccgtcggccacatccgc
gacctcccccgaggcgccgccgacatccccgccaaatacaagaaggaaccctgggcccgg
ctcggcgtcgacgtcgaccacggcttccagcccctgtacctggtcagcccggacaagaag
aagaaggtcaccgagctgaagcggctgctcgccggcgtcgacgagctgtacctcgccacc
gaccccgaccgcgaaggcgaggccatcgcctggcacctgctcgaagtgctcaagccgaag
gtgcccgtgcgccgcatggtgttccacgagatcaccaagcccgccattctcgaggccgcc
aacaacacccgcgaactcgatcagaacctcgtcgacgcgcaggaggcgcgccgcatcctc
gaccgcctgtacggatacgaagtgtcgcccgtgctgtggaagaaggtcatgccgcggctg
tccgccggtcgcgtgcagtccgtggccacccgagtcatcgtcgaacgcgagcgggaacgc
atggcgttcatctccgccggctactgggacctcggcgcgacgctggacacggggtccgag
cccgtcgactccacccagccgcgcatgttcgacgcccgcctcaccgccgtcgaaggcaag
cgcgtcgccgccggccgcgacttcgacgaccggggtcagctgaagaagcccgagggcgtc
accgtcctgcgcgaggccgacgcccgttcgctcgccgacggcctgaccggagccaccctg
tcggtggcctccgtcgaggaaaagccctacacccgccggccgtacccgccgttcatgacg
tcgacgctgcagcaggaggccgggcgcaagctccacttcacctccgagcgcaccatgcgc
atcgcccagcgcctttacgaaaacggtcacatcacctacatgcgaaccgactcgacgacc
ctgtcgaagtcgggcatcgaggccgcgcgtcgtcaagcccgcgacctgtacggcccggag
tacgtcgccgacgctccccggcagtaccagcgcaaggtcaagaactcccaggaggcgcac
gaagccatccgccccgccggcgagcgcttcgccacgcccggcgagctggccggagcactg
gacgccgaggagttcaagctctacgaactgatctggcagcgcaccgtcgcctcgcagatg
tcggacgcccgcggtacgtcgatgaaggtcgtcgtcgccggcacctccgccaccgacggc
ggcgcccgcgaggtggaactgtccgccaccggccgcaccatcaccttcccgggcttcctc
aaggcctacgtcgaggtgtcgcagctcggcgacggacgcaacgtcgccgacaacgccgaa
cgccgcctgccgcgcctggaaaccggccagtctctcggcgtcgactccgtcaccccggag
ggccactccaccaacccgccggcccgctacaccgaagcgtcgctggtgaagaagatggag
gacctcggcatcggccgcccgtcgacctacgcgtcgatcatcaagaccatccaggaccgc
ggctacgtgtactcgcgcggcaacgccctggtgccgtcgtgggtggcgttcgccgtcgtc
ggcctgatggaggattccttcgccgacctggtcaactacgacttcacctccgacctggaa
gacgagctcgacgagatcgccgcgggctccgaggaccgcacccgctggttgaccggcttc
tacttcggcgactcggaggagcacggttccggcggcgccgacgccatcgccgcgcgcggc
ggcctgaagaacatcatcgacgtcaacctcgaggccatcgacgcccgccgcgtcaactcg
ctgcacgtcttcgacgacgccgacggaaacccgatcgtcgtgcgcgtcggccgctacggc
ccgtacctggagcgcgtgcgcccgggcgccggcgaatccggtgccgacctggtgcagcgg
gccaacgtgccggagtcgatgaccccggacgagctggacctggaaaccgccgagaagctt
ctggccatgccgcagggcggccgcgagctgggcctgaacccggacaacggccgcatgatc
gtggcgaaggacggccgctacggcccatacgtcacggagatcgtcaccgacgaggagaag
gccggcgtcgaggtcaaggccgagcagatcgtcgccgaagagcgcgccgcagaggacaag
cagcgcgcggccgacggcatgcgcaagaagaactgggaaaccaagaccgcggcgaaccag
aaggccaagcgcatcgccgcgatcgtcgaggagaccctgaagccgaagacggcgtcgctg
ttcgcgtcgatggagccgtcgacggtgacgctggaggaggcgctgaagctgctgtcgctg
ccgcgcgaggtcggcgtcgaccccaccgacggcgaggtcatcacggcccagaacggccgc
tacggtccgtacctgaagaaggggtccgactcgcgttcgctggcgtccgaggagcagctg
ttcacggtgaccctcgacgaggcccgccgcatctacgcggagccgaagcgccgtggccgc
gccgccgcgaagccgccgctgaagcagctgggcgacaatgacgtctccggcaagccgatg
acggtcaaggacggtcgtttcggcccgtacgtcaccgacggcacgacgaatgcgtcgctg
cgcaagggcgacaacccggagaccctgacggacgcccgcgccaacgagctgctgtcggag
cgccgcgccaaggaggccgccacgggtggaccgggggccaagaagacggccaagcgatcg
acgaagaagacgaccaagaagaccgccaagaaggccaccaagaagtcgacgaagaagacg
gccaagaagaccaccaaaaaaacggccaagaagacgacgaagaagtcgtaa
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