Corynebacterium freneyi: I6L56_10300
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Entry
I6L56_10300 CDS
T08562
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cfy
Corynebacterium freneyi
Pathway
cfy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6L56_10300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfy03021
]
I6L56_10300
03400 DNA repair and recombination proteins [BR:
cfy03400
]
I6L56_10300
Enzymes [BR:
cfy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I6L56_10300
Transcription machinery [BR:
cfy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6L56_10300
DNA repair and recombination proteins [BR:
cfy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6L56_10300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QXA52437
LinkDB
All DBs
Position
2355361..2356377
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEDYIDSSRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTIPGVKEDVSDIILNIKGLVLSSDFDEPATVYLRREGGGAVTAADIECPAGVEIHN
PDHHIATLNESGRLDIEMVVERGRGYVPAQPNSGGEIGRIPVDQIYSPVLKVSYKVEATR
VEQRTDFDKLIIDVETKNSITARDAMASAGKTLVELFGLARELNEAAEGIEIGPSPQQSE
DIAAYSMPIEDLDFSMRSYNCLKREEIHTVGELAARTESDLLDIRNFGDKSINEVKVKLS
ELGLSLKDSPNDFDPGAIEGYDAATGEWTEDAEVGYDE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcccagcgccccacgctcaccgaggattacatcgattcctcgcgctcccgg
ttcgtcatcgagccgctggagccgggtttcggctacaccctcggcaattcgcttcgtcgc
accctgctgtcgtccattccgggcgcggcggtgacgagcatccgcattgacggcgtgctg
cacgagttcaccaccatcccgggcgtgaaggaggatgtctccgacatcatcctgaacatc
aagggcctggtgctgagctccgacttcgacgagccggccaccgtgtacctgcgtcgcgag
ggcggcggagccgtcaccgcggccgacatcgagtgcccggcgggcgtggagatccacaac
ccggatcaccacatcgccacgctcaacgagtcgggtcgtctggacatcgagatggtcgtc
gagcgcggtcgcggctacgttcccgcccagccgaactccggcggcgagatcggccgcatc
ccggtcgaccagatctactccccggttctgaaggtcagctacaaggtcgaggcgacccgc
gtcgagcagcgcaccgacttcgacaagctgatcatcgacgtggagacgaagaactccatc
accgcccgcgacgccatggcgtcggccggcaagaccctggtggagctcttcggcctggcc
cgcgagctcaacgaggccgccgagggcatcgagatcggcccgtccccgcagcagagcgag
gacatcgccgcctactccatgcccatcgaggacctggacttctccatgcgctcctacaac
tgcctgaagcgcgaggagatccacacggtcggcgagctcgccgcccgcacggagtcggac
ctgctggacatccgcaacttcggcgacaagtccatcaacgaggtcaaggtcaagctctcc
gagctgggcctgtccctgaaggactcgccgaacgacttcgacccgggcgccatcgagggc
tacgacgccgccaccggggaatggaccgaggatgcggaggtcggctacgacgagtag
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