Campylobacter fetus subsp. venerealis 84-112: CSG_12780
Help
Entry
CSG_12780 CDS
T03740
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA/Rep, epsilon proteobacterial type 2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfz
Campylobacter fetus subsp. venerealis 84-112
Pathway
cfz03420
Nucleotide excision repair
cfz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSG_12780
03430 Mismatch repair
CSG_12780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfz03400
]
CSG_12780
Enzymes [BR:
cfz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSG_12780
DNA repair and recombination proteins [BR:
cfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSG_12780
MMR (mismatch excision repair)
Other MMR factors
CSG_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
DUF2340
eIF3_p135
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CDF65189
LinkDB
All DBs
Position
1252741..1254798
Genome browser
AA seq
685 aa
AA seq
DB search
MDNLLDSLNKSQKEAASHIDGAMLILAGAGSGKTKTITTRLAYLISVVGIDPLNTLTLTF
TNKAASTMKHRALSMLNSNISSSPLLCTFHKFGLLFLKFYINELGRKNSFVIIDTDDKKK
IIKEFESSVAASVISNEISKYKNLLLSVEDVISSSKLNAENQFMKTNYEKIAKAYKLYEE
YLAANNLVDFDDLLALTYKILLNNNDLANEISNRYKYIMVDEYQDTNDLQYKLLRKLCEC
HENLVVVGDDDQSIYGWRGAKIENILNFKDQFNNVKLIKLEENYRSTPSILKAANELIDH
NRSRLGKQLFSTKKDEYPIQIIENGDENIEARVIAGQIQKLLGSGVKADEIAILYRVNAL
SRSLEDGLNKARIPYKMVGGVKFYERMEIKDIISYLRLILNPNDDFSLNRIINRPKRGLG
KVSLAKLEKFAYENKTSIYNAIYMIDDDTIGKKLRVVLLDFANELKELSSLAPNNLLANL
EKSFGIKEYYRNLPDGVDRVANIDEFYALIKDQIQNDESFALEEFLNELALESEQDRISD
DAISIMSVHASKGLEFEHLFVIGLEEGFFPLIGDGSDIEEERRLAYVAITRAKSGLNLSF
SNSRFYKGQRARLNKSRFLSETGLCEGSLKLETSNEFKKGDLIKHKIFGIGRVMEITKIK
SEFKLKINFAGNIKEIMSSFVEKVV
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggataatctactagactctttaaacaaaagccaaaaagaagcagcctcacatatcgat
ggcgctatgttaatattagcaggagctggaagcggcaaaactaagactattacaactaga
ctagcttacttaatcagcgtagttggcatagacccgttaaatacattaaccctaacattt
acaaataaagcagcaagcactatgaaacaccgcgccttgtctatgttaaactcaaatatc
agctcatctccgcttctttgtacttttcataaattcggtcttttgtttttaaaattttat
ataaatgagctaggtagaaaaaatagctttgtcattatagatacggatgacaaaaaaaag
attataaaagagtttgaaagtagtgttgccgcctcagttatatcaaacgaaatttcaaaa
tacaaaaatctgcttttaagcgtagaagatgttataagtagctcaaaactaaacgcagaa
aatcagtttatgaaaacaaattacgaaaaaatagcaaaagcatacaaactatatgaagag
tatttagccgcaaacaatcttgtggattttgacgatcttttagctcttacatataaaatt
ttactaaataataacgaccttgcaaatgagatttcaaatagatataaatatataatggta
gatgagtatcaagacacaaacgaccttcagtataaactactaagaaaattatgcgagtgt
catgaaaatctagtagtagtaggcgatgatgatcaaagcatatatggctggcgcggtgca
aaaatagaaaatattttaaatttcaaagatcaatttaataacgtgaaattaatcaaactt
gaagaaaactaccgctctactccgtccatcttaaaagctgcaaatgagcttatagatcat
aatcgctcaaggttgggaaagcagctatttagtactaaaaaagacgaatatccgattcaa
atcatagaaaacggcgatgaaaatatagaagcaagagttatagcgggtcaaattcaaaaa
ttattaggatctggtgtcaaagcagatgaaatagcaatattgtatagagtaaacgctttg
tctcgtagccttgaagatggtttaaataaagctagaattccatataaaatggtgggcgga
gttaaattctatgagagaatggagataaaagatataattagctatttaagacttatatta
aatccaaacgatgatttttctttaaaccgcataataaaccgaccaaaaagaggtcttggg
aaagtaagccttgcaaagcttgaaaaatttgcttatgaaaataaaacgtctatttataac
gctatatatatgatagatgatgatacgataggaaaaaaattgagagtcgttttattggat
tttgcaaatgagttaaaagagttaagctcattagctccaaacaatctgctagcaaattta
gaaaaaagttttggtataaaagagtattatagaaatttacccgacggggtagatagagta
gcaaatatagacgagttttatgcgcttataaaagatcaaatacaaaatgatgagagtttt
gctttagaagagtttttgaatgagctagctttagaaagtgagcaagatagaataagcgat
gatgcgatatctattatgagcgtgcatgcgagcaaaggacttgagtttgaacatcttttt
gttatagggcttgaagagggattttttccacttattggcgatggaagcgatatagaagaa
gagagaaggcttgcttatgtagctataactagagcaaaaagcggattaaatctttcattt
tcaaactcaagattttacaaaggtcaaagagcaagactaaataaatcgagattcttaagt
gaaacaggactttgtgaaggttcgcttaaacttgaaactagtaatgagttcaaaaaaggc
gatctcatcaaacataaaatttttggtatcggcagagttatggagataacaaaaataaaa
tctgaatttaaattaaaaatcaacttcgcaggaaatataaaagagataatgtcgagtttc
gtggaaaaagtcgtatga
DBGET
integrated database retrieval system
