Campylobacter fetus subsp. venerealis 84-112: CSG_14610
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Entry
CSG_14610 CDS
T03740
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cfz
Campylobacter fetus subsp. venerealis 84-112
Pathway
cfz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSG_14610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfz03021
]
CSG_14610
03400 DNA repair and recombination proteins [BR:
cfz03400
]
CSG_14610
Enzymes [BR:
cfz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSG_14610
Transcription machinery [BR:
cfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSG_14610
DNA repair and recombination proteins [BR:
cfz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSG_14610
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CDF65372
LinkDB
All DBs
Position
complement(1422328..1426467)
Genome browser
AA seq
1379 aa
AA seq
DB search
MLNSLYSGNRLRVDFSNVAKEIDVPNLLQLQKKSFDHFLNLDNSQTESGIEKVFKSIFPI
HDPQNRLTLEYVSSEISKPRYTVRECMERGLTYCVNLKIKIRLIVHDRDEKTSEKVGVKD
IKEQEIFVREIPLMTDRISFIINGVERVVVNQLHRSPGVIFKEEESPTVVNKLIYTAQII
PDRGSWLYFEYDTKDVLYVRINKRRKVPITILFRALGYKKQDIVKLFYPIQTLNIKNNKF
LTMFNPDDFSGRVDYDIKDEDGNILHQAGKRLTKKKADKLIEDGLKFVEYPIEVLVNRYL
ASPVIDKESGEVIYDTLTQLDENKLAKIVAEQNSIEIANDLASGVDDAIINSFLQDYETL
KLLKQTEGLEDENDLAAIRIYKVMRPGEPVVKEAARTFVNDLFFNPERYDLTKVGRMKMN
HKLGLSVPEYVTVLTNEDIIKTAKYLIKVKNGQGYIDDRDHLGNRRIRSIGELLANELHL
GFVKMQKAIRDKFTSLSNNVDELMPYDLVNPKMITTTIMEFFTGGQLSQFMDQTNPLSEV
THKRRLSALGEGGLVKERAGFEVRDVHPTHYGRICPVETPEGQNIGLINTLSTYAKVNDL
GFVESPYRRVIDGKVTNEIVYLTATQEEGHIIAPASTVLDANDIIKEDLIEVRRDGEMLL
AKREDVTLIDLCSGMVMGVAASLIPFLEHDDANRALMGSNMQRQAVPLLRSTAPIVGTGM
EAIVARDAWEAIKAKRGGVIEKVDNRNIFILGEDENGPYIDQYTMEKNLRTNQNTTFSQH
PIVKKGNMVKSGQIIADGSSMEKGELAIGKNALIAFMPWNGYNYEDAIVMSERMIRADAF
TSVHIYEKEIEARELKDGVEEITRDIPNMKEEDLMHLDESGIVKIGTHIKPGMILVGKVS
PKGEVKPTPEERLLRAIFGEKAGHVVNKSLYAGASLEGVVIDVKIFTKKGYEKDARSFKA
YEDEKNILEKEHHDRLLMLDREEMLRVTALLSKNPLESELEIGKNSYKKGDKIKRSDLDN
VNRFTLNTYVKCFSKEIQKTYEDMKAYFQNEKKKLKDEHDAKLEILEKDDILPSGVVKLV
KVYLATKRKLKVGDKMAGRHGNKGIVSNIVPDVDMPYLPNGRTVDIVLNPLGVPSRMNIG
QILESHLGLVGMKLGEQIEEIFENKKAEWIKELRAKMTEIADVSRLMDAKAILSKIDDDK
LIDYARDWASGVRFATPIFEGVKADEFKKLFEMAKIDMDGKTELYDGRTGSKMAERVNVG
CMYMLKLHHLVDEKVHARSTGPYSLVTQQPVGGKALSGGQRFGEMEVWALEAYGAAHTLR
EMLTVKSDDVEGRLAAYKALTRGENVPSTGIPETFFVLTNELKSLALDVEIYDEEENNE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgctaaatagcctatattctggaaatcgtctcagagttgatttttcaaatgttgcaaaa
gagattgatgttccaaatttattacaattgcaaaaaaagagttttgatcattttttaaat
cttgataattcacaaaccgaaagcggaattgaaaaagtatttaagtcgatattcccaata
catgatcctcaaaatagacttacattagagtatgtcagcagcgaaataagtaagccaaga
tatacagttagagagtgtatggaaagaggacttacgtattgcgtaaatttaaaaattaaa
attagactgattgtacatgacagagatgaaaaaacaagtgaaaaagtcggtgtcaaagat
ataaaagaacaagaaatttttgtacgtgaaattcctcttatgactgatagaatttcattt
ataataaacggcgtagaaagagtcgtagtaaatcagcttcatagaagcccaggtgttata
tttaaagaagaagagagtccaactgtagtaaataaactaatatatacagcacaaattata
ccagatcgcggtagctggctctatttcgaatatgacacaaaagatgttttatatgtgcgt
ataaataaaagaagaaaagttcctataacgattctttttagagcgcttggatataaaaaa
caagatatagtaaagttattttaccctatccaaacattaaatataaaaaataataaattt
ttaaccatgtttaatccggatgatttttctggaagagttgattatgatataaaagatgaa
gatggaaatattttacatcaagcaggaaagagacttacaaagaaaaaagcagataagctt
attgaagatggactcaaatttgtagagtacccgatagaagttttggtaaatagatatttg
gctagtccagttatcgataaagagagcggcgaagttatttatgatactttaactcagcta
gatgaaaataaattagcaaaaatagtagctgaacaaaatagtatagaaatagcaaatgat
cttgcaagcggtgttgatgatgctattattaactcatttttacaagattatgaaacgcta
aaattacttaagcaaactgaaggcttagaagatgaaaatgacctggctgctattagaatt
tataaagttatgcgcccaggagagcctgtagttaaagaagctgcaagaacgtttgtaaat
gatctattttttaacccagaaagatatgatcttacaaaagtaggtcgtatgaaaatgaat
cataaattaggtcttagcgttcctgagtatgttactgtacttacaaatgaagatattata
aaaactgctaaatatctgataaaagtaaaaaacggacaaggttatatagatgatagagat
cacttaggtaaccgtcgtatcagatcaataggcgagcttttagcaaatgagcttcatttg
ggatttgtgaaaatgcaaaaagctattagagataaatttacaagtcttagtaataacgta
gatgagcttatgccttatgatctagtaaatcctaaaatgataactacgactattatggaa
ttttttacaggcggtcagctcagccaatttatggatcaaacaaatcctcttagcgaagtt
acgcataaacgtcgtttgtcggctcttggcgaaggcggtttagtaaaagagcgtgccgga
tttgaagtacgtgacgtgcatccgactcattatggtagaatttgccctgttgagactcca
gaaggtcaaaatatcggtcttatcaacactctttctacatatgcaaaagtaaatgatcta
ggatttgttgaatcaccttatagaagagtaatagacggtaaagtcacaaatgagattgtt
tatttaacagctactcaagaagagggtcatattatagctccagcttcaactgtattagat
gcaaacgatattataaaagaagatcttatagaagtaaggcgagatggagaaatgcttctt
gcaaaaagagaagacgtaacattgatagatctttgtagtggtatggttatgggcgttgcc
gcttctttgataccgtttttagagcatgatgatgcaaaccgtgcacttatgggttcaaac
atgcagcgtcaagcagttcctcttcttagatctacagcacctatagtaggaaccggtatg
gaagctatagttgcaagagacgcgtgggaggctataaaagctaaacgtggtggcgttata
gaaaaagttgataatagaaacatatttattcttggtgaagatgaaaacggtccatatatt
gatcaatatactatggaaaaaaatttaagaactaaccaaaatacaacttttagccaacat
cctatagttaaaaaaggcaatatggtaaaatcaggacagataatagctgatggctcgagt
atggaaaagggcgagttagccataggtaaaaatgctcttatagcatttatgccttggaat
ggttataattatgaagatgctattgttatgagtgagagaatgatacgcgcagacgcattt
actagcgttcatatatatgaaaaagagatagaagcaagagagctaaaagacggtgtagaa
gagataactagagatattccaaatatgaaagaagaagatcttatgcacctagatgagagc
ggtatagtaaaaataggcactcatatcaaaccaggaatgattttggtgggtaaagtttca
ccaaaaggagaggtaaagccgactcccgaagagagacttcttagagcaatatttggtgaa
aaagcaggtcacgttgtaaataaatctttgtatgccggagctagtcttgaaggtgtggtt
atagatgttaagatatttacaaaaaaaggctatgaaaaagacgctagatcatttaaagca
tatgaggatgaaaagaatattttagaaaaagaacatcatgacagacttttaatgcttgat
cgtgaagagatgttaagagttactgctttattatctaaaaatcctcttgagagtgagcta
gagatcggtaaaaatagctataaaaaaggtgataagataaaaagatcagatcttgataat
gtaaatagatttactcttaacacctatgtaaagtgcttttcaaaagaaattcaaaaaaca
tatgaagatatgaaagcttattttcaaaatgagaagaagaaattaaaagacgagcatgac
gctaaacttgaaattttagaaaaagatgatatattgccaagcggtgtagttaagttagtt
aaagtatatttagctacaaaaagaaaattaaaagtaggcgataagatggcaggacgtcat
ggcaataaaggtattgtatcaaatatagttccggatgttgatatgccgtatcttccaaat
ggacgtacggtagatatagttttaaatccattaggcgttccaagtcgtatgaatataggt
caaattttagaaagccacctaggtttagttggtatgaaattaggagagcagattgaagaa
atctttgaaaataaaaaagccgaatggataaaagagctaagagcaaaaatgactgagata
gcagatgtatctcgtcttatggatgctaaagctattttaagcaaaattgatgatgataag
ctcatagattatgctagggactgggctagcggggttagatttgctactcctatttttgaa
ggtgttaaagctgatgaatttaaaaagttatttgagatggcaaaaatagatatggatggt
aaaaccgaactttatgacggacgtaccggatcaaagatggctgagcgtgttaatgttgga
tgtatgtatatgttaaaacttcaccacttagttgatgaaaaagttcatgcaagaagtacc
ggaccatactctttagtaacacaacaaccagttggtggtaaagctctaagcggtggtcaa
agatttggagaaatggaagtttgggcacttgaggcttatggcgcagctcatactttaaga
gaaatgctgactgtaaaatctgatgacgtagagggtcgtttagctgcttataaagcactt
actagaggagaaaatgtaccaagtactggtattccagaaacgttttttgttttaacaaat
gagctaaaatctctagcacttgatgttgagatctatgatgaggaagagaataatgagtga
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integrated database retrieval system
