Campylobacter fetus subsp. venerealis 84-112: CSG_16460
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Entry
CSG_16460 CDS
T03740
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
cfz
Campylobacter fetus subsp. venerealis 84-112
Pathway
cfz02020
Two-component system
cfz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSG_16460
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSG_16460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfz03021
]
CSG_16460
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cfz02035
]
CSG_16460
Transcription machinery [BR:
cfz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSG_16460
Bacterial motility proteins [BR:
cfz02035
]
Flagellar system
Flagellar assembly proteins
Stator
CSG_16460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_r3
UPF0122
KORA
DUF1617
UPF0175
GPS2_interact
DUF5611
HTH_24
HTH_37
MarR_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
CDF65557
LinkDB
All DBs
Position
1604461..1605165
Genome browser
AA seq
234 aa
AA seq
DB search
MNELKQKQLDAYQKEIKKSQDELVLSYMPALRAMAFRLKSRLPSSIEVNDLISVGATAMV
KLSRTYDKEQNDSFWGYVKQRVYGSMIDYLRGLDFLSRGNRKLVKDIDNAINEYFNKFEC
EPDDAYLAKILGEDEAKIREARNLSDVSATFPIDEQSQLLSESDTESKIEKDELIQKITD
VLNEFGEREQMIIQLYYYEELSLKEISDILGITESRISQIHKRLITKIRERLGF
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagttaaagcaaaagcagcttgacgcttatcaaaaagagataaaaaaaagccaa
gatgaactcgttttatcatatatgcctgctcttagagctatggcttttagacttaaatcc
agacttcctagctccatagaagtaaatgatctaataagcgtaggcgctactgctatggta
aaactatcaagaacatacgataaagagcagaacgatagcttctggggatatgtaaaacaa
agagtttatggttctatgatcgattatttaagaggtcttgattttcttagtagaggaaat
agaaaactagtaaaagatatagacaacgctataaacgagtattttaataaatttgagtgc
gaacctgacgatgcttatttagcaaagattttaggtgaagatgaagcaaagataagagag
gctagaaatcttagtgatgtatccgctacattccccatagatgaacaatctcagcttctt
agcgaatcagataccgaaagcaaaatagaaaaagacgaactcatacaaaagatcacggac
gttttaaacgaatttggcgaacgagaacagatgataatacaactttactactatgaggaa
ctaagtttaaaagagattagtgatattttaggtattaccgaatctagaattagtcaaatt
cataaaagactcattacaaaaattagagaaaggctaggcttttaa
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