Cellulomonas gilvus: Celgi_0798
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Entry
Celgi_0798 CDS
T01537
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cga
Cellulomonas gilvus
Pathway
cga03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Celgi_0798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cga03021
]
Celgi_0798
03400 DNA repair and recombination proteins [BR:
cga03400
]
Celgi_0798
Enzymes [BR:
cga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Celgi_0798
Transcription machinery [BR:
cga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Celgi_0798
DNA repair and recombination proteins [BR:
cga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Celgi_0798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
BssS
Cluap1
Motif
Other DBs
NCBI-ProteinID:
AEI11317
UniProt:
F7ZZH1
LinkDB
All DBs
Position
882451..886317
Genome browser
AA seq
1288 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRAWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
NCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITWVDEDGRHEDLPNLQNEIDLERKEIADRRDNDINNRAAKLEAD
LAELEAEGAKADARRKVRDSAEREMAQIRKRADAEIERLEQVWDRFKNLKVADLEGDEML
YRQLQDRYGNYFEGSMGAAAIQKRLEAFDLEAESDNLREIIKTGKGQRKTRALKRLKVVN
AFLTTSNSPTGMVLDAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIHLHPLVCAAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGLFHLTSDKDDAEGAGR
AFSSVSEAIMAFDQGTLDLNAVVKIRFDDLVLDEDVAPEGWEPGQTLLFETTLGRALFNE
LLPVDYPYENGVVDKKRLSVIVNDLAERYPKVAVAASLDALKEAGFRWATRSGVTIAISD
VATPSAKAAILEEHEARAAKVQGQYEKGLITDDERRQELIEIWTQATDKVAKAMQENFPA
RNTVFRMVGSGARGNWMQVRQIAGMRGLVANPKGEIIPRPIKSNYREGLSVLEYFIATHG
ARKGLADTALRTADSGYLTRRLVDVSQDVIVREEDCGTERGLTMPIGVAGTDGLRRHDKV
ETSVYSRTLATDIEVDGEVIGHAGDDVGDVLLDRLLESGVDTLKVRSVLTCESRVGTCAK
CYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRVQELF
EARTPKGEAPIAEFSGRIAIEEGDRSRRIVLTPDDGSEEIAYPITKRSRLLVNDGDQVAV
GTQLVQGAVDPKKVLRILGPRKTHEHLVDEVQEVYRSQGVDIHDKHIEVIVRQMLRRVTV
LDSGSTDLLPGELAERGRFEDANRQAVAEGGQPASGRPELMGITKASLATDSWLSAASFQ
ETTRVLTEAAMSGRSDPLLGLKENVILGKLIPAGTGLPRYRNIAVEPTEEAKAELYPTFG
YDEIDFPALGLGSGDAIPLEDIDFGDFR
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgtcaacgtcttcgacgagctgcgcatcggcctggccacggccgacgacatc
cgtgcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccggaccctgaag
ccggagaaggatggcctgttctgcgagaagatcttcggccccacccgggactgggagtgc
aactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacgcgctccaaggtgcgccgtgagcgcatgggccacatcgagctggccgccccc
gtcacgcacatctggttcttcaagggtgtgccgtcgcgtctgggctacctgctcgacctg
gcgcccaaggacctcgagaaggtcatctacttcgcggcctacatgatcacgtgggtcgac
gaggacggtcgccacgaggacctgccgaacctccagaacgagatcgacctggagcgcaag
gagatcgcggaccgccgcgacaacgacatcaacaaccgggccgccaagctcgaggccgac
ctggccgagctcgaggccgagggtgccaaggccgatgcgcgccgcaaggtccgcgactcg
gccgagcgtgagatggcgcagatccgcaagcgtgcggacgccgagatcgagcgcctcgag
caggtctgggaccggttcaagaacctcaaggtcgcggacctcgagggcgacgagatgctc
taccgccagctgcaggaccgctacggcaactacttcgagggctcgatgggcgccgcggcg
atccagaagcgtctcgaggcgttcgacctggaggcggagtccgacaacctgcgcgagatc
atcaagacgggcaagggccagcgcaagacgcgtgccctcaagcgtctcaaggtcgtcaac
gcgttcctcacgacgagcaactcgcccacgggcatggtgctcgacgcggtcccggtcatc
ccgccggacctgcgcccgatggtccagctggacggtggccgcttcgccacgtcggacctg
aacgacctgtaccgccgcgtcatcaaccggaacaaccgcctcaagcggctcctcgacctg
ggcgcgccggagatcatcgtcaacaacgagaagcggatgctccaggaggccgtggactcg
ctgttcgacaacggccgtcgcggtcgcccggtcacgggccccggcaaccgtccgctgaag
tcgatctccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggcctgcccaagcagatggcgctcgagctgttcaagccgttcgtcatgaagcggctc
gtggacctcaaccacgcccagaacatcaagtcggccaagcgcatggtcgagcgcgcccgc
cccgtggtgtgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaaccgt
gcgcccacgctgcaccgtctgggcatccaggcgttcgagccgcagctggtcgagggcaag
gccatccacctgcacccgctcgtctgcgccgcgttcaacgcggacttcgacggtgaccag
atggccgtgcacctgcccctgagcgccgaggcgcaggccgaggcccgcatcctcatgctc
tcgagcaacaacatcctcaagccgtcggacggccgtccggtgaccatgccctcgcaggac
atgatcatcggcctgttccacctgacgtcggacaaggacgacgccgagggcgcgggccgg
gcgttcagctcggtgtccgaggcgatcatggcgttcgaccagggcaccctggacctcaac
gcggtcgtcaagatccgcttcgacgacctggtcctcgacgaggacgtggcgcccgagggc
tgggagcccggccagacgctgctgttcgagaccacgctgggccgtgcgctgttcaacgag
ctgctcccggtcgactacccgtacgagaacggcgtcgtcgacaagaagcgtctctcggtg
atcgtcaacgacctcgccgagcgctacccgaaggtcgccgtcgcggcgtccctcgacgcg
ctcaaggaggccggcttccgctgggccacgcgttcgggcgtcaccatcgccatctcggac
gtcgcgaccccgtcggcgaaggccgcgatcctcgaggagcacgaggcgcgtgccgccaag
gtgcagggtcagtacgagaagggcctcatcaccgacgacgagcgtcgccaggagctcatc
gagatctggacccaggccaccgacaaggtcgccaaggcgatgcaggagaacttccctgcc
cgcaacacggtgttccggatggtcggctcgggtgcgcgaggcaactggatgcaggtccgc
cagatcgccggcatgcgcggcctcgtggcgaacccgaagggcgagatcatcccgcgcccg
atcaagtccaactaccgcgagggcctgtccgtcctcgagtacttcatcgccacgcacggt
gcccgcaagggtctggcggacaccgctctgcggaccgccgactcgggctacctcacgcgt
cgtctggtggacgtctcgcaggacgtcatcgtccgcgaggaggactgcgggaccgagcgc
ggcctgaccatgccgatcggtgtggcggggaccgacggcctgcgccgccacgacaaggtg
gagacgagcgtgtactcgcgcacgcttgccaccgacatcgaggtggacggcgaggtcatc
ggccacgcgggtgacgacgtcggcgacgtgctgctggaccgtctgctcgagtcgggcgtc
gacacgctcaaggtgcgctcggtgctcacgtgcgagtcgcgcgtcggcacgtgcgcgaag
tgctacggccgttcgctggccacgggcaagctcgtcgacatcggcgaggccgtgggcatc
atcgcggcccagtcgatcggtgagccgggtacgcagctgacgatgcgtaccttccacacc
ggtggtgtggcctcggccgacgacatcacgcagggtctgccgcgtgtccaggagctcttc
gaggcccgcacccccaagggtgaggcgcccatcgcggagttctcgggccggatcgcgatc
gaggagggtgaccgctcgcgccgcatcgtgctcacgcccgacgacggctccgaggagatc
gcctacccgatcacgaagcgctcgcgtctgctggtgaacgacggcgaccaggtcgccgtc
ggcacgcagctggtgcagggtgccgtggacccgaagaaggtcctgcgcatcctgggcccg
cgcaagacgcacgagcacctggtggacgaggtccaggaggtctaccgctcgcagggcgtg
gacatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcggcgcgtgacggtg
ctcgactccggctcgaccgacctgctgcccggcgagctcgccgagcgtggccggttcgag
gacgcgaaccggcaggcggtcgccgagggcggccagcccgcgtcgggccgtccggagctc
atgggcatcaccaaggcctcgctcgcgacggactcgtggctgtcggcggcctccttccag
gagaccacccgcgtcctcacggaggcggcgatgtcgggtcggtccgacccgctgctgggc
ctcaaggagaacgtcatcctcggcaagctcatccccgccggcacgggcctgccccgctac
cgcaacatcgcggtggagccgaccgaggaggccaaggccgagctgtacccgacgttcggc
tacgacgagatcgacttccccgccctgggcctcggctcgggcgacgcgatcccgctcgag
gacatcgacttcggcgacttccgctga
DBGET
integrated database retrieval system
