Cellulomonas gilvus: Celgi_1176
Help
Entry
Celgi_1176 CDS
T01537
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cga
Cellulomonas gilvus
Pathway
cga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celgi_1176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cga03019
]
Celgi_1176
03009 Ribosome biogenesis [BR:
cga03009
]
Celgi_1176
Enzymes [BR:
cga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Celgi_1176
Messenger RNA biogenesis [BR:
cga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Celgi_1176
Ribosome biogenesis [BR:
cga03009
]
Prokaryotic type
rRNA processing factors
Celgi_1176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
DUF5351
Motif
Other DBs
NCBI-ProteinID:
AEI11695
UniProt:
F8A1N8
LinkDB
All DBs
Position
1297525..1300785
Genome browser
AA seq
1086 aa
AA seq
DB search
MTEQSTPENAVQAGTTGVTAGGEPTAAPPRRRRASRPAAAPEAVVTDAASTDAVASDQPT
ASPESQADAPPEAAPEAAKAPAKRRRATRSKAAPEVEAAAPAAEVEGAASEPLADEAAPA
VPTEAVTPAAAEKPARRRRAASRPAAAPTADDEQAAPQGAPAEPAAPAADVPAVEAAAET
PAPARRRSRRATTAPAIEQPTPEPAVEDAPQEVASAPVAEPAAQPAAPAPSTGSPRLATT
ALLFQAPDPTQARQRRRRVTSSAGSPEEISQAARLAQEAEQAAALQAAAEVGEDELDEAA
LAEAEAAAPTAEPDEPAEGTDARGGRRRSRRGRGGRGRGASADRDEDAEESDDAAQAQGA
DDVVVPAEADETTDADEATDTDDESDAGDDQPRRRRRRGGRGRRKNDTDRDDETTDADAG
EPAAQDAPDDADDESGEGSSRRRRRRRRGARTGEAESEPRRRGGDEVTALRGSTRLEAKR
QRRREGRDAGRRRQIITESEFLARRESVDRSMIVREKAGRTQIAVLEDGVLVEHYVSNQQ
QASMVGNVYLGRVQNVLPSMEAAFVDVGKGRNAVLYAGEVNWDAAGLDGQPRRIEQALKS
GDAVLVQVTKDPIGHKGARLTSQVTLAGRYLVYVPGGGMTGISRKLPDTERNRLKKILRE
VVPDSAGVIVRTAAEGASEDELRADIARLQGQWEAIEKKAKTASAPALLQGEPDMAIRVV
RDIFNDDFGALQVQGDEAWSTISSYIDELAPDLAQKVSKYTGTGDVFAAHRIDEQLVKGM
DRKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGTLEETVTRNNLEAAEEIVRQLRLRD
IGGMIVIDFIDMVLESNRDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRVGQGLVE
AFSETCEHCHGRGFIVHDEPIEKGARPEAAPTPAAAADEPKRARRKRGAKEPAAPAAHPV
VPVLPEERSAVKATLATIAAAAAHAHELHDQHASEAPEADAQAPEPAASPVADAPVDEPV
VAAPVDVPAGTEAVVAEPVAEAPVLDVFAEFAGRRPGSDEPDQLELTPVDPSVFVTFDSD
DDETSV
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcagagcacccccgagaacgcagtccaggctggcacgaccggcgtcaccgcg
gggggtgagcccaccgcggccccgccgcgccgccgccgcgcgtcgcgccctgcggcggca
cccgaggccgtcgtgaccgacgccgcgtccaccgacgccgtggcgtccgaccagccgacc
gcgtcgcctgagtcccaggcggacgccccgccggaggcggcccccgaggccgccaaggca
ccggccaagcgccgtcgggcgacgcggtcgaaggccgcgcccgaggtcgaggcagccgcg
cccgcggcagaggtcgagggcgctgcctccgagccgctcgccgacgaggccgcgccggcc
gtgccgacggaggccgtgacgcccgctgccgccgagaagcccgcgcgccgccgccgtgcc
gcgagccgccccgcggcggcgccgacggccgacgacgagcaggccgcgccgcagggtgcg
cccgccgagcccgccgcgccggcggccgacgtgccggccgtggaggctgccgccgagacg
cccgcaccggcccgccgccgcagccgccgcgccaccacggcgcccgcgatcgagcagccc
accccggagcctgccgtcgaggacgcgccgcaggaggtcgcgtcggctcccgtcgccgaa
cccgccgcacagcccgccgcgccggcgccgagcaccggcagcccgcgcctggccacgacg
gcactgctgttccaggcgccggacccgacgcaggcgcgtcagcgtcggcgtcgtgtgacg
tcgagcgcgggctcgcccgaggagatctcgcaggcggcccgcctcgcgcaggaggccgag
caggccgccgcgctgcaggccgctgccgaggtgggcgaggacgagctcgacgaggccgcg
ctcgcggaggccgaggccgccgcgccgaccgcggagcccgacgagcccgccgagggcacg
gacgcgcgtggcggtcgccggcgcagccgccgcggtcgcggtggccgcggtcgcggcgcg
tccgccgaccgtgacgaggacgccgaggagtccgacgacgctgcccaggcgcagggcgcg
gacgacgtcgtcgtgcccgcggaggccgacgagacgacggacgccgacgaggccacggac
acggacgacgagtccgacgcgggtgacgaccagccgcgccgccgccgtcgccggggcggg
cgtgggcgccgcaagaacgacacggaccgcgacgacgagacgacggatgccgacgcgggc
gagcccgcggcgcaggacgcgccggacgacgcggacgacgagtcgggcgagggctcgagc
cggcgccgtcggcgtcgccgtcgtggtgcgcgcacgggtgaggccgagagcgagccgcgt
cgccgcggtggcgacgaggtcaccgcgctgcgcggctcgacccgcctcgaggccaagcgg
cagcgccggcgcgaggggcgcgacgcgggacggcgtcgtcagatcatcaccgagtccgag
ttcctcgcccggcgcgagtcggtggaccgctcgatgatcgtgcgcgagaaggccggtcgc
acccagatcgcggtgctggaggacggcgtcctcgtcgagcactacgtctcgaaccagcag
caggcgtccatggtgggcaacgtctacctgggccgcgtccagaacgtcctgccgagcatg
gaggcggcgttcgtcgacgtgggcaagggtcgcaacgcggtgctgtacgcgggtgaggtc
aactgggacgcggcgggcctcgacggccagccgcgccggatcgagcaggcgctcaagtcg
ggtgacgcggtcctggtgcaggtcaccaaggacccgatcggccacaagggcgcgcgcctg
acctcgcaggtcacgctcgccggccgctacctggtgtacgtgccgggcggcggcatgacc
ggcatcagccgcaagctcccggacaccgagcgcaaccgcctcaagaagatcctgcgcgag
gtcgtgccggactccgcgggcgtgatcgtccgcaccgcggccgagggggcgagcgaggac
gagctgcgcgccgacatcgcgcggctccaggggcagtgggaggccatcgagaagaaggcc
aagaccgcgtcggcgcccgcgctcctgcagggcgagccggacatggccatccgcgtggtc
cgcgacatcttcaacgacgacttcggcgcgctgcaggtccagggcgacgaggcatggtcg
acgatctcgtcgtacatcgacgagctcgcgcccgacctcgcgcagaaggtctcgaagtac
accggcacgggtgacgtgttcgcggcgcaccggatcgacgagcagctggtcaagggcatg
gaccgcaaggtctggctgccctcgggcgggtcgctggtgatcgaccggaccgaggcgatg
accgtcgtcgacgtcaacaccggcaagttcacgggttcgggcggcacgctcgaggagacc
gtgacgcgcaacaacctcgaggccgccgaggagatcgtccgtcagctccggctgcgggac
atcggcggcatgatcgtcatcgacttcatcgacatggtgctcgagtccaaccgtgacctg
gtgctgcgtcgtctggtggagtgcctgggccgggaccggaccaagcaccaggtcgccgag
gtgacgtcgctcggcctggtccagatgacgcgcaagcgcgtgggtcagggcctggtggag
gcgttctccgagacgtgcgagcactgccacggccgcggcttcatcgtgcacgacgagccg
atcgagaagggtgcccgccccgaggcggcgccgactcccgcggccgcggcggacgagccc
aagcgcgcgcgccgcaagcgcggcgccaaggagcccgcggcgcccgccgcgcaccccgtg
gtgcccgtgctgcccgaggagcgctcggcggtcaaggcgacgctcgcgaccatcgcggcg
gccgcggcgcacgcgcacgagctgcacgaccagcacgcgtccgaggcgcccgaggcggac
gcgcaggcccccgagcccgcggcgtcgccggtcgcggacgcacccgtcgacgagcccgtc
gtcgcggccccggtggacgtcccggccgggacggaggccgtggtcgccgagccggtggcc
gaggcgcccgtgctggacgtgttcgcggagttcgcgggccgccgtcccgggtccgacgag
cccgaccagctcgagctcacgccggtcgacccgtcggtcttcgtgacgttcgactcggac
gacgacgagacctcggtgtga
DBGET
integrated database retrieval system
