Chryseobacterium gambrini: PFY09_00670
Help
Entry
PFY09_00670 CDS
T08920
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam03030
DNA replication
cgam03430
Mismatch repair
cgam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFY09_00670 (holA)
03430 Mismatch repair
PFY09_00670 (holA)
03440 Homologous recombination
PFY09_00670 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgam03032
]
PFY09_00670 (holA)
03400 DNA repair and recombination proteins [BR:
cgam03400
]
PFY09_00670 (holA)
Enzymes [BR:
cgam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFY09_00670 (holA)
DNA replication proteins [BR:
cgam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFY09_00670 (holA)
DNA repair and recombination proteins [BR:
cgam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFY09_00670 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
WBV52833
LinkDB
All DBs
Position
149877..150914
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLILKNIKNKEVLPIYFFHGEEPYFIDLAVKALEHDFLTEDEKAFNQTVVYGKDTT
YQEVLSLARQFPMMGDKQVIIVKEAQDLRLAESESNALEMYVQNPVPSTVLVFAHKHKKL
DSRKKVTKSLEKAKALFLSESIRENNLPKWIADECAALKIKTAPNISHLLAEYLGNDLSR
IANELNKLKIILKEGEILDGTIIENHIGISKEYNVFELQKALGTKNANAAFKIAHFMGKN
PKNNPFVMMLASLYNYFSNVIIYNTMIGQPPQTIAAQMGVNPYFIKDYAESARLYPLKHA
TRVISILREFDMKGKGLGAVNMSEAELIKELVYKIINVDKIKMKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttaatcctcaaaaatattaaaaataaagaagttttaccgatttat
ttttttcacggagaagaaccctattttatagatcttgctgtaaaagcacttgagcacgac
tttctgacggaagatgaaaaagcattcaaccaaaccgtagtctatggcaaagataccact
tatcaggaagttctctctttggcgagacagtttcccatgatgggagacaaacaggtaatc
attgtaaaagaagcacaggatttaagactcgctgaaagcgaaagcaatgctttggaaatg
tacgttcagaatcctgttccgtccaccgttctggtttttgcgcacaaacacaaaaaatta
gacagccgaaagaaagtcaccaaatctttagaaaaagcaaaagcattatttttaagcgaa
tcaatccgcgaaaataatcttcccaaatggattgcagacgaatgtgccgcactaaaaata
aaaacagctccgaatatctcacatcttttagcggaatatttaggaaacgacctttcaaga
attgccaatgagctgaataaactgaaaattatcctgaaagaaggtgaaattttagacgga
accatcatcgaaaaccacatcgggatcagcaaagaatacaatgtttttgaattacagaaa
gctttaggaacaaaaaacgccaacgcagcatttaaaattgcacattttatgggcaaaaac
cctaaaaacaatccctttgtcatgatgttggcaagtttatacaattacttttccaatgtc
attatttacaacaccatgattggtcagccgcctcagacaattgccgcacaaatgggtgta
aatccttattttataaaagattatgcagagtcggcaagattatatcctttaaaacatgca
accagagtcatttcaattttaagagaattcgatatgaaaggaaaaggattgggcgcagta
aatatgagcgaagccgaactgattaaagaattggtttacaaaattataaatgtcgataaa
attaaaatgaaagtatga
DBGET
integrated database retrieval system
