Chryseobacterium gambrini: PFY09_02420
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Entry
PFY09_02420 CDS
T08920
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cgam
Chryseobacterium gambrini
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgam03009
]
PFY09_02420
Enzymes [BR:
cgam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PFY09_02420
Ribosome biogenesis [BR:
cgam03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PFY09_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
WBV53176
LinkDB
All DBs
Position
554983..556131
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AA seq
382 aa
AA seq
DB search
MSRDNNNSERPKRPRISTKKNSDNSRASRSGNSSESKPFKKSFPKAGERNSDSRKSGGTS
YQDRMDKKFGKTEKEPFITSSGEEKKSFGKSAPKRGGSRPNTFDTRDKYERGSLKYGRRP
GTENREDKNKSFVQKRRLSKIEKDVHKDTIRLNKYIANSGICSRREADELITQGLVEVNG
KVVTEMGYQVQKTDKVVFDGQNITPEKPVYVLLNKPKGYISTTKDDKARKTVMDLVANAS
PYRVFPVGRLDRSTTGVILLTNDGHMTKKLTHPSFDAKKIYHVTLDKKLTHEDMKLIAEG
IRLDEGVAEVDQISFIEGKPKNEVGIEIHIGWNRVIRRIFQRLGYEVEALDRVMFAGLTK
KNIKRGHWRILTEQEVNNLKML
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcagagataataataattcagaacgaccaaagagaccaagaatttcaactaagaaa
aattctgataattctcgtgcttccagatctggaaattcttcagaatcaaaaccttttaaa
aaatctttcccgaaagcaggagagagaaattcagactcaaggaaaagtggtggcaccagt
taccaggaccgaatggataagaaattcggaaaaactgaaaaagagcctttcataacgagt
tcaggtgaagaaaaaaaatctttcggcaaatctgccccaaaaagaggaggaagcagaccc
aatacttttgatacgagagataaatacgaaagaggaagcctgaaatacggaagaagaccc
ggaacagaaaacagagaggataaaaataaatcttttgtacagaaaagaagactgtctaaa
attgagaaggatgtacataaagacaccatccgtctgaataaatacatcgccaattccgga
atctgcagcaggagagaagccgatgagctgattacgcaaggtctggtggaagtaaacgga
aaagtggtaacggaaatgggatatcaggttcagaaaacggataaagtggttttcgacgga
cagaatattacacccgaaaagccggtttacgttcttcttaacaaaccaaaagggtatatt
tctaccacaaaagacgacaaagccagaaaaacagtaatggatcttgtagcgaacgcttca
ccgtacagagtttttccggtaggaagattagaccgttctacaaccggagttattctttta
acgaacgacggccatatgacgaaaaaactgacgcacccgtcttttgatgcaaagaaaatt
tatcatgtaacattggataaaaagcttacacacgaggatatgaagcttattgcggaagga
atccgtctggatgaaggagttgctgaagtagatcagatttcgttcatcgaagggaaaccg
aaaaatgaagtgggaatcgaaattcacatcggatggaaccgtgttatcagaagaattttc
cagagattaggatatgaagtggaagccttagaccgagtaatgtttgccggattaacgaag
aaaaacattaaaagagggcactggagaatccttacagaacaggaagtaaataatcttaaa
atgctttaa
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