Chryseobacterium gambrini: PFY09_02790
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Entry
PFY09_02790 CDS
T08920
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam00541
Biosynthesis of various nucleotide sugars
cgam01100
Metabolic pathways
cgam01250
Biosynthesis of nucleotide sugars
Module
cgam_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PFY09_02790 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cgam01005
]
PFY09_02790 (kdsA)
Enzymes [BR:
cgam01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PFY09_02790 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
cgam01005
]
Lipid A
PFY09_02790 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
WBV53249
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All DBs
Position
complement(630682..631491)
Genome browser
AA seq
269 aa
AA seq
DB search
MIQYLDNIHHKDSRNFFLIAGPCIIEGEDMALKIAEKVVELTNKYNIPYIFKGSFKKANR
SRVDSFTTIGEEKSLEILKKVGETFNIPTTTDIHENEHAALAAQYVDVLQIPAFLVRQTD
LLVAAAQTGKCVTLKKGQFLSPESMKFAVEKITDSDNQKVAIIERGNTFGYTDLVVDYRG
IPTMRNYAPVILDVTHSLQQPNQSSGVTGGRPDLIETIAKAGIAVGADGIFIETHPTPET
ALSDGANMLRLDLLEDLLQKLTRVREAIL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgattcagtatttagataatatccaccacaaagattccagaaactttttcctaattgcc
ggtccctgcatcatcgaaggcgaagacatggcactgaaaattgcagaaaaagtggtagaa
ttaaccaataaatataatattccctacatttttaaaggaagctttaaaaaagccaaccga
agcagagtagactcttttaccacgatcggagaagaaaaatctctggaaatccttaaaaaa
gtgggggaaacattcaatattccgacaacaacagatattcacgaaaacgagcacgcagct
ttggcggcgcaatatgtagatgtgttgcagattcctgcgtttttggttcgacagacagac
cttttggttgccgcagcacaaacaggaaaatgtgtgaccttaaaaaaaggacagtttctc
tctccggaatccatgaaatttgccgttgaaaaaattacagactcagacaatcagaaagtg
gcgatcattgaaagaggaaatacctttggttacacagatttggtggtggattacagagga
attccaaccatgagaaactatgcgcctgtcattctggatgttacgcattccctgcaacag
cccaaccaaagttcaggagttacaggaggaagaccggatcttatcgagaccatcgcaaaa
gcaggaatcgcagtaggtgcagacggaattttcatcgaaacgcatcccactcccgaaacc
gctttatccgacggagccaatatgttgagactggatcttctggaagatttactgcaaaaa
ctaaccagagttcgggaagcgattttataa
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