KEGG   Chryseobacterium gambrini: PFY09_03335
Entry
PFY09_03335       CDS       T08920                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cgam  Chryseobacterium gambrini
Pathway
cgam03030  DNA replication
cgam03430  Mismatch repair
cgam03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cgam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFY09_03335
   03430 Mismatch repair
    PFY09_03335
   03440 Homologous recombination
    PFY09_03335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cgam03032]
    PFY09_03335
   03400 DNA repair and recombination proteins [BR:cgam03400]
    PFY09_03335
Enzymes [BR:cgam01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFY09_03335
DNA replication proteins [BR:cgam03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PFY09_03335
DNA repair and recombination proteins [BR:cgam03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PFY09_03335
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: WBV53356
LinkDB
Position
746688..747242
AA seq 184 aa
MDFCAIDFETATHERNSACELGICVVQDSKIIETKTWLIKPPSFPYFSPFNVDVHGILPD
DVKDAPTFDEIWYEVEEMMYGTLMIAHNAGFDAGVLRGCLNHYGMFTPKLNYLCSIQLAK
KSWNYLPRYGLKHLAEYHQISFNHHRAGDDAEVCAKISLLAFEKLFLTSNEEVNDLMKLK
IKKL
NT seq 555 nt   +upstreamnt  +downstreamnt
atggatttctgcgcaatagattttgaaacggcaactcacgagcgaaattccgcgtgtgag
cttggaatctgtgttgtgcaggattcaaaaatcattgagactaaaacatggctcatcaaa
cctcctagttttccttatttcagcccgtttaatgtggatgttcacggtattcttccagat
gatgtaaaagatgctcctactttcgatgaaatctggtatgaagtggaagaaatgatgtac
ggaacgttaatgattgcccataacgcaggatttgacgcaggtgtacttcgcggatgtctg
aatcattatggaatgtttactccaaaactcaactatctctgcagtattcagttagctaaa
aaatcatggaattatcttccgagatatggattaaaacatcttgctgaataccaccagatc
agttttaaccatcacagagcgggtgacgatgcagaggtttgtgctaaaatatctttactg
gcttttgaaaaactgtttctcacaagcaatgaagaggtgaatgatctgatgaaattaaaa
ataaaaaaactttaa

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