Chryseobacterium gambrini: PFY09_08030
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Entry
PFY09_08030 CDS
T08920
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam02020
Two-component system
cgam02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFY09_08030 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PFY09_08030 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgam03021
]
PFY09_08030 (rpoN)
Transcription machinery [BR:
cgam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFY09_08030 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
WBV54259
LinkDB
All DBs
Position
complement(1796384..1797847)
Genome browser
AA seq
487 aa
AA seq
DB search
MLKQHLQLKLGQKLAPQQIQLMKLIQLHTLEFEEELERELEENPALEIAKEESKEDDYSS
LEDSYETEGTESIETDFDVDQYLYDDEPSYKTSSSNYSSDDEEFDNESLLTEGQSLYDYL
LEQIHLANINKEDLKIAEYLIGNLDTDGYLRREIKSIVDDLAFSQGIYTTKENVEDILEN
YVQKLDPPGVGARGLQECLLLQIEKKVSSDKAVSLAANILRHQFDALTNKHYNKIIQKYD
IEEEDLKDALDEISKLSPKVGGNFDTQTITINQEIIPDFVIQVKDGQVIPMLNSKNAPTL
RVSEEYKDILSTYSHDKNSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLLQTITAIVKF
QKDYFLTGDEKSLRPMILKDIADITGFDISTISRVVKSKYADTPNGIIYLKDLFSDSLTN
DDGEEVSTKEIKMHLQEVISKENKRKPLTDDALVVILKEQGYNIARRTIAKYREQLNIPV
ARLRKEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaacacttacaactcaaattaggacaaaagctggctccccagcaaatccaa
ttgatgaagttgatccagcttcacacattggagtttgaagaggaacttgagagggagtta
gaagaaaacccggcattagagatcgcaaaagaagaatctaaagaggacgattattcttct
ctggaagattcatatgaaacagaaggtacagaaagcattgaaacagattttgatgtagac
cagtatctttacgatgatgaaccgagctataaaacgtcttccagtaactattcttccgat
gatgaagaatttgataatgaaagccttttaacggaaggacagtcattatacgattatctt
ttggagcagatccatcttgccaacatcaataaagaagatttgaagatcgcagaatatctt
atcgggaatctcgatacagacggatatttaagaagagagatcaaatctattgtggatgat
cttgccttttctcaggggatttataccaccaaagaaaatgtagaagatatccttgaaaat
tatgtgcagaaactggatcctcccggagtaggagcgagaggtcttcaggaatgcctgttg
ctgcagattgagaaaaaagtaagttcagataaagccgtttctctggctgccaatattctg
agacatcagtttgatgctttaacgaacaagcactacaacaaaatcatccagaaatacgat
attgaggaagaagatttgaaagatgctttagatgaaatttcaaaattatctccaaaagtt
ggcggaaatttcgatactcagacgattacgatcaatcaggaaattattccggattttgta
attcaggtgaaagacggacaggttattccgatgctgaacagcaaaaatgcacctacttta
agagtttcagaagaatacaaagatattttatctacttattcgcatgataagaattctgca
gaacacaaacaggcagcattgttcatcaagcagaaattagatgctgcaaaatggtatatt
gatgcaattaatcagcgtcagaatacattattgcaaaccattactgcgattgtgaaattt
cagaaagactatttccttaccggagatgaaaaatctttgagacccatgattcttaaagat
attgccgatattacaggcttcgatatttcaacgatttcaagagtggtaaaaagcaaatac
gccgatactccaaacggaattatttatctgaaggatctgttctcggatagcttaacaaat
gatgatggggaagaggtttctacaaaagagatcaagatgcaccttcaggaagttatcagc
aaagaaaataagagaaaaccattaacggatgatgctttggtggtgatcttaaaagaacag
gggtacaatattgccagaagaacgattgcaaagtatcgtgaacagcttaatattccggta
gcaagattaagaaaagaactctaa
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