Chryseobacterium gambrini: PFY09_10230
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Entry
PFY09_10230 CDS
T08920
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PFY09_10230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgam03400
]
PFY09_10230
DNA repair and recombination proteins [BR:
cgam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PFY09_10230
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WBV50718
LinkDB
All DBs
Position
2272598..2273383
Genome browser
AA seq
261 aa
AA seq
DB search
MKAIWNGAIGFGLVNIPVKIYSATETTKLDLDMLDKSDFSNIRFKRVNENTGKEVKWENI
VKGYLMDDKYIILDEEDYEAASPEKSKILSIDQFVKESEVDSVYFENPYYLEPQKNGENA
YRLLLKALAKTEMVGVGTFVLRESEAIGMIRPYNNEVLVLNRLRFAQEIRDYGDLKIPAA
KAPKPAELKMAVNLIEQLSQEFDPEMYKDTYSEALMKIIKQKAKGKNIKTKKAEPAKEGK
VIDLMAQLKASLQNTKSKNAS
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaatctggaacggcgccattggctttggattagtcaatattcctgtaaaaata
tattctgctaccgaaaccaccaaactggatttggatatgcttgataagtctgatttttcg
aatatcagatttaaaagagtgaacgaaaatacaggcaaggaagtgaaatgggaaaatatt
gtaaaaggatatctcatggacgacaaatacattattctggatgaagaagattatgaagct
gcaagtcctgaaaaatccaaaatcctttctattgatcagtttgtaaaagaaagtgaagta
gattctgtttattttgaaaatccgtactatctcgaacctcagaaaaatggtgaaaatgct
tatcgccttttgctgaaagctctggcaaaaacagaaatggtgggagtaggaacatttgtt
ctgcgcgaaagtgaagccatcggaatgatccgcccatataacaatgaagtgttggtttta
aaccgattgagattcgcacaggaaatcagggattacggagatcttaaaattccggcggcg
aaagctccgaaacctgctgaattaaaaatggcagtaaacctcatcgaacagctttcacag
gaatttgatcctgaaatgtacaaagacacgtattctgaagctttaatgaagatcatcaaa
cagaaagcgaaaggtaagaacatcaaaacgaaaaaagccgaacctgcaaaagaaggaaaa
gtaattgatctgatggcgcagctaaaagccagtttacagaataccaaatctaaaaacgca
tcataa
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