Chryseobacterium gambrini: PFY09_11460
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Entry
PFY09_11460 CDS
T08920
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
cgam
Chryseobacterium gambrini
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgam03000
]
PFY09_11460
Transcription factors [BR:
cgam03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PFY09_11460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
OpuAC
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
WBV50950
LinkDB
All DBs
Position
complement(2538613..2539563)
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AA seq
316 aa
AA seq
DB search
MNIQQLEYLIAVDKYKHFGKAAQACFITQPTLSAMIQKFEDELDVKVFDRTTHPIRTTDV
GLQIIDQAKVIIESVNELKNKANLLNNILGGTINIGIIPTVSSFILPTEIFKFLEENPKI
QMNVKEMTTDNIIKALKAGELDAGIISTPYDAADEFYQDFLFNEELMIYSSEKEANKKNS
YVVPEELNVEKVWLLEEGNCLRNQFENICHLKENTLKPKNLDFLASNIQTLVHMVDKVGG
ISILPELALNQLSDVQKENVFRFKKPFPYREISIIYYKPTFKQKIIDELSHSIRNSLEKK
LNYHENPKEFVSIKPQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcagcaactcgagtatcttatcgcggttgataagtacaaacattttgggaaa
gcggctcaagcatgcttcattacgcagcctacattaagtgcaatgatacagaaatttgag
gatgaactggatgtgaaggttttcgacagaacaacgcacccgatccgtaccacagatgtt
gggcttcagatcatcgatcaggcgaaggtgattatagaatctgtcaatgaacttaaaaat
aaagccaatcttttaaacaatattttaggaggaaccatcaacatcggaattattcctacc
gtttcttctttcatcctgcctacagaaatcttcaaatttttggaagaaaacccgaaaatt
cagatgaatgtaaaggaaatgacgacagacaacatcatcaaagctttgaaagcaggagag
ttggatgccggaattatttccacaccttatgatgcggcagatgaattttatcaggatttc
ttatttaatgaagaattgatgatttacagttctgagaaagaagccaacaagaaaaactct
tatgtggttcctgaagaactgaatgtagaaaaagtgtggctgcttgaagaaggaaactgt
ctgagaaaccaattcgaaaatatctgtcatttaaaagaaaatacattaaagcctaaaaac
ttagattttctcgcttctaatatccagactttggttcacatggtggataaagtaggagga
atcagtattttgccggagctggctcttaatcagctttctgatgtacagaaggagaatgtt
ttcagatttaagaagcctttcccgtacagagaaatcagcattatttactacaaaccgacc
tttaagcagaaaattattgatgaattatcgcattctatcagaaattctttagagaaaaaa
ctgaattatcacgaaaatccgaaagaatttgtaagcataaaaccgcaatag
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