Chryseobacterium gambrini: PFY09_13375
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Entry
PFY09_13375 CDS
T08920
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam00470
D-Amino acid metabolism
cgam00550
Peptidoglycan biosynthesis
cgam01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFY09_13375 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFY09_13375 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
PFY09_13375 (murD)
Enzymes [BR:
cgam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PFY09_13375 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
Precursor biosynthesis
Amino acid ligase
PFY09_13375 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
GIDA
Pyr_redox_2
DAO
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
Pyr_redox
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
WBV51320
LinkDB
All DBs
Position
complement(2946868..2948205)
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AA seq
445 aa
AA seq
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MKIVVLGGGESGCGAAYLAKKKGMEVFLSDKGAIKDNYKRFLNENGIEFEEGSHDEERIL
NADWIVKSPGIPKKAEMIQKINEKGIRLSSEIEFASEFTDAKIIAITGSNGKTTTTSLIY
YILKNDGLNVGLGGNIGYSFAKQVADENHEYYVLEVSSFQLDDIQNFRPYISLLLNLSQD
HLDQYNYNYEEYALAKFRITENQENDNFFIYNKDDEMSKNILEKLEIKAKMIPFSTKEKL
EEGGFINSETIEVKLKDTFSMKLDELSLLGTHNVANSLAASIAGKILEINNESIRNSLMT
FQAVEHRLELVTEIEGVKYINDSKATNVNATYYALESMKTPTVWIVGGLDKGNDYTEIEE
LVKRKVKAIVCLGIDNEKIINFFKDKKEFIYDTSSMEKAVEISKSLAEKGDTVLLSPCCA
SFDLFKNYEDRGHQFKEQVLKANGN
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagttgttttaggaggaggagaaagtggttgcggagctgcctatctggcaaaa
aagaaaggaatggaagtttttctttccgataaaggtgccatcaaggataactacaaacgg
tttctgaacgagaatggaattgaattcgaagaaggaagccacgatgaagaaagaatttta
aacgccgactggattgtaaaaagtccgggaattccgaaaaaggcagaaatgattcagaaa
attaacgagaaaggaataagactttcttctgagattgaatttgcttcggaatttacagat
gcgaaaatcatcgccatcacaggaagcaacggaaaaacaacaacaacgtctctcatctac
tacatcctgaaaaacgacggattaaacgtaggtttaggcggaaatatcgggtacagcttc
gcaaagcaggttgccgatgaaaaccatgaatattatgttctggaagtaagctctttccag
ttggacgatattcagaatttcagaccgtatatttctttattgttgaatttgtcacaggac
catctggatcagtacaattacaactatgaagaatatgctttggctaaattcagaataacg
gagaatcaggaaaatgacaactttttcatctacaataaagatgatgagatgagcaaaaat
attcttgaaaaattagaaattaaagcgaaaatgattcctttctccaccaaagaaaaactg
gaagaaggaggtttcattaacagcgaaaccattgaagtaaaactgaaggatactttttca
atgaaacttgatgaattatctcttctgggaactcacaatgttgccaacagcttagccgcg
tcaattgccggtaaaatattggaaatcaataatgaaagcataagaaattcattaatgact
tttcaggcggttgaacacagactggagcttgtgactgaaattgagggtgtaaaatacatc
aacgacagcaaggcaaccaacgttaatgcaacgtattacgctttagaaagtatgaaaact
ccgaccgtttggatcgttggaggtttagataaaggtaatgactatactgaaattgaagaa
ttagtcaaaagaaaagtaaaagcaatcgtctgcttaggaattgataatgaaaagattatc
aacttctttaaagacaaaaaagaatttatttacgacacgtcgagcatggaaaaagcagtg
gagatctcaaaatctctcgctgaaaaaggagatacggttttactgtctccgtgctgtgca
agttttgatttattcaaaaactatgaagacagaggtcatcagtttaaagagcaggtatta
aaagccaatggcaattag
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