Chryseobacterium gambrini: PFY09_13755
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Entry
PFY09_13755 CDS
T08920
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam03030
DNA replication
cgam03430
Mismatch repair
cgam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFY09_13755
03430 Mismatch repair
PFY09_13755
03440 Homologous recombination
PFY09_13755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgam03032
]
PFY09_13755
03400 DNA repair and recombination proteins [BR:
cgam03400
]
PFY09_13755
Enzymes [BR:
cgam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFY09_13755
DNA replication proteins [BR:
cgam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFY09_13755
DNA repair and recombination proteins [BR:
cgam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFY09_13755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
WBV51391
LinkDB
All DBs
Position
3022693..3023916
Genome browser
AA seq
407 aa
AA seq
DB search
MYSIIDIESNGAGYRKECIIDIAVYRYDGQKIVDQFISLVNPESDITPFVQKLTNITPKM
VKTAPKFHEIARRIVEITANTTLVGHNIDFDYRMLRQSFQRLGYEFKINTLDTIPLAKKL
IPDEVSYSLGKLVKSLGIPLTNHHRAEGDARATLELFKLLISKDTENEIIQKQHDETNAK
TYINKIKELTQDLPNEKGFVYFQNEAGKIIFSDHVQDVNKFSKKVFNSKSKKWETIQKDV
EQINYELTGTDIIAKLILNSKGIKKREILPFGLYCRNGKYVVEKNKLNKLEKPILKFRSF
TQGSKAVQFIAKFEEYNDIEVFKKKIEFRKRNELWLGQGRKLGEKLFLIVENGKVVSYGF
YELFTQIQTLGKLNKLKIDLLSQSADLVNELQLALLRGDFETLPLPK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtattcaataatagacatagaaagtaatggtgcaggttacaggaaagaatgcattatc
gatattgcggtttacagatatgacggtcagaaaattgtggaccagtttatttcattggta
aaccccgaaagtgatattaccccttttgtgcagaaattaaccaatattaccccgaaaatg
gttaaaactgcaccgaaattccatgaaatagcccgaagaattgttgaaattacggcaaat
acaactttagtaggtcataacatagattttgattacagaatgcttcgtcaatcgtttcag
aggttgggttatgagtttaaaatcaatactttagatacaattcctttagctaaaaaactg
attccggatgaggtaagttattctctcggaaaattggtgaaatctttaggaattcctcta
accaatcatcacagagcagaaggcgatgcaagagcaacgctggaattattcaaacttctg
atttcaaaagacacagaaaacgaaatcattcagaagcagcatgatgaaaccaatgcgaaa
acctacatcaacaaaatcaaggaattaacgcaggatttgccgaatgaaaaaggctttgtg
tattttcagaatgaagcgggaaagatcattttttccgatcatgttcaggatgttaacaaa
ttttcgaaaaaagtttttaattccaaatctaaaaagtgggaaaccattcagaaagacgtt
gaacagatcaattacgaacttaccggaacggatattattgccaagctgattctgaattca
aaaggaatcaaaaaaagagaaatccttcctttcggtctgtattgcagaaacggaaaatac
gtagtggaaaaaaataagctgaataaactggaaaaaccgattttgaaattcaggtctttt
acgcaaggatcgaaagcagtacagttcatcgcaaagttcgaagaatataatgatatagag
gtttttaaaaagaaaatcgaattcagaaaacgaaatgaactttggctaggacaaggcagg
aaactgggagaaaaactgtttttgattgtcgaaaacggaaaagtggtttcttacggtttt
tatgagcttttcacacagattcagactttaggcaagctaaataaattaaagattgatctt
ctttcacaatctgcagatcttgtaaatgagctgcagttggctttgctgagaggagatttt
gaaaccctgcctttgccgaaatag
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