Chryseobacterium gambrini: PFY09_13805
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Entry
PFY09_13805 CDS
T08920
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
cgam
Chryseobacterium gambrini
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
HTH_50
AAA_2
AAA_5
MCM
HTH_28
HTH_23
Mg_chelatase
HTH_29
HTH_11
HTH_22
AAA
HTH_1
HTH_17
HTH_7
Motif
Other DBs
NCBI-ProteinID:
WBV51401
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Position
3032597..3033889
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AA seq
430 aa
AA seq
DB search
MSNELQNIKNRFGIIGNFPALNRALEKAIQVAPTDISVLVIGESGVGKEFIPKIIHSESK
RKHQPYIVVNCGAIPEGTIDSELFGHEKGAFTGATATRKGYFEVADGGTIFLDEVGELPL
QTQVRLLRVLESGEFMKVGSSQVQKTNVRIVAATNVNMMKAIQDGRFREDLYYRLNTVQI
DMPPLRERKGDIHLLFRKFAIDFAEKYRMPELELEPSAVHYIENYTFPGNIRQLRNLVEQ
MTVVERNRHVAVEKLAEYIPMESHLPMVVNTPNTPKQNDFGSEREIMYKILFDMRNDIND
LKSLTSELIKNRGTSDLSSHEKNLINRIYTPETQQNVAPGSLLYFENNNNHNPVVQNPTI
ISEPDNSYEDIEDIEIEENRPESLSLQNNEKDLIIKALEKHKGRRNKAADELGISQRTLY
RKIKQYNLEE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgagcttcaaaatataaaaaaccgtttcggaatcatcggaaactttccggct
ttaaaccgtgctttggaaaaagccatacaggtcgcaccaaccgacatttcagtccttgtt
atcggagaaagtggagtggggaaagaatttattccgaaaattatccattcagaatccaaa
aggaaacatcagccttatattgtcgttaactgtggagcaattcccgaaggaacgattgat
tccgaactgttcggacacgaaaaaggagcatttacaggagctacagcaaccagaaaagga
tatttcgaagttgccgatggcggaacgatctttttagatgaggtgggagaacttccttta
cagacgcaggttcgtttacttcgtgttttggaaagcggcgaatttatgaaagtaggttct
tcacaggttcagaaaacgaatgtaagaattgtcgctgcaacaaatgtgaacatgatgaag
gcaattcaggacggaagattccgtgaagatctttattatcgtctcaatacagtgcagatt
gatatgccgcctttgcgtgaaagaaaaggggatattcatttgcttttcagaaaatttgcc
atcgattttgctgaaaaatacagaatgccggaactggaacttgagccaagcgcagtacat
tacatcgaaaattatacgtttcccggaaatatccgtcagttaagaaatttagtggaacaa
atgacggtcgtagaaaggaacagacacgtagccgttgaaaaactggcggaatatattccc
atggaatcacatcttccgatggttgttaatacaccgaatacaccaaaacagaacgatttc
ggaagcgaaagagaaatcatgtacaaaattctatttgacatgagaaacgatattaatgat
ttaaaatccttaacttcggaattgataaaaaatcgcggaacatctgatctgagcagtcac
gagaaaaatttaatcaacagaatttatactcctgaaacacagcagaatgtggctcccggt
tctttactgtattttgaaaacaataataatcataatccggtagttcagaatccgacaatt
atttcagagccggacaacagttacgaagatattgaagatattgaaattgaagaaaacaga
cccgaatctttatcccttcagaataacgaaaaagatttgattatcaaagcattggaaaag
cataaaggaagaagaaacaaagcggcagacgaactgggaatttcccaaagaactttatac
agaaaaataaaacaatataacttagaagaataa
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