Chryseobacterium gambrini: PFY09_13960
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Entry
PFY09_13960 CDS
T08920
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam00550
Peptidoglycan biosynthesis
cgam01100
Metabolic pathways
cgam01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PFY09_13960
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PFY09_13960
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
PFY09_13960
Enzymes [BR:
cgam01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PFY09_13960
Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PFY09_13960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WBV51432
LinkDB
All DBs
Position
3059970..3062003
Genome browser
AA seq
677 aa
AA seq
DB search
MNTRYLKIFSVLIVIALIFVARIAYLQLFTDRYALNAANTSIKIEYVIPQRGVIFDRNGK
ILVGNQPAYEISFTQALMRPDFDTVGFCNLMKISKNDFIRTIENIKKEKYYSKLTPMTFM
KNLSREDIARVQEIIFKYPAFSIVSRPQRQYEVSTSGNLLGYTSEVNEREIKKDSAYYLP
GDFIGKTGVEKAYEKDLRGVKGMKYIQKDIKLRNVGPYKNGSLDKDVITGKDITLTIDYD
LQRIAEEMLVNKHGAIVAIDPNNGEVLVAATGPDIDPNLFTGPNKSKNLYALSKDTIYEN
KPTFDRSLQAAYPPGSTFKLLTALSAMQMGVMDENTVFPCGGGFNYRGLRIKGHGGADPL
IPAIQVSSNCYFSYAYLAILNKYPGNPSKGVDEWKKIMSSFGVGEFLNNDFAVGAKGRIP
TGEFYEKRMASIYKASGSKKDPKNWDPLATGAVFNGMGQGDVLVTPLQLANYVAAIANKG
WYYTPHIVKSIDGKPNPDPRFKKKHQTLVDKKHFEPVLKGMEAVVLRGTAHGLKSNDFTQ
LAKTGTAQVPQGKDNSIFVLIAPADKPKIVVAAVMEHAGFGATWAGPASTVIAEKFITGD
LKRENLYKKMTSSSFMPEYKRQWIADLKRKGLYKEPVDSVKQKRIQDSLKFVKEQKAKLQ
KQIDIETKNNKTKPAKQ
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacacgttatttaaaaatcttttccgttcttatcgttatcgctctgatttttgta
gcgagaattgcttatttacagttatttacggatcgttatgctttaaatgcagccaatact
tccattaaaattgaatacgttattccgcaaagaggagtcatttttgaccgcaacggcaaa
attctggtgggaaaccagcctgcctacgaaatttccttcactcaggctttaatgcgtcct
gattttgataccgtaggattctgtaacctgatgaagatatcgaaaaatgatttcatcaga
accatcgaaaatattaaaaaagaaaaatattattccaagctgactcccatgaccttcatg
aaaaatctaagccgtgaagacattgcgagagttcaggaaatcatattcaaatatcccgct
ttcagcatcgtttcaagacctcagcgacagtatgaagtttctacgtctggaaatcttttg
ggatataccagtgaagttaacgaaagggaaattaaaaaggactctgcgtattacttaccg
ggcgatttcatcggaaaaacaggagttgaaaaagcctacgaaaaagaccttcgcggagtg
aagggaatgaaatacattcagaaggacatcaaactgagaaatgtaggaccttataaaaac
ggatctttagataaggacgtcatcacaggaaaagacatcacccttaccatagactacgat
ttgcagagaattgccgaagaaatgcttgtcaataagcatggcgccattgtagcaattgat
cccaataacggagaagttctggtggctgcaaccggaccggatatcgatccgaatcttttt
acaggaccgaataaatctaaaaatctatacgctttatccaaagatacaatttacgaaaac
aaaccgactttcgaccggtctttacaggcggcttatcctcccggttccacatttaaattg
ttaaccgctttgtctgcaatgcagatgggcgtaatggacgaaaatacagtgtttccttgt
ggaggcggatttaattacagagggttgagaattaaaggtcacggtggcgcagatccgctg
attcctgctattcaggtttcgagtaactgttacttttcgtacgcttatttagcaattctc
aataaatatcccggaaatccttcgaagggagttgacgaatggaaaaagatcatgagcagt
ttcggagtaggggaatttttgaacaatgattttgcagtaggtgcaaaaggaagaattcca
accggagaattttatgagaaaagaatggcttctatttataaagcaagtggttctaaaaaa
gatcctaaaaactgggatcctttggcaaccggggctgttttcaacggaatgggacaggga
gacgtattggtaactccgcttcagcttgccaattatgtggctgcaatcgccaataaagga
tggtattacactccgcatatcgtgaaatcgatcgacggaaaacccaatccggatccgaga
ttcaaaaagaagcatcagactttggttgataaaaaacattttgaacctgtgctgaaagga
atggaagccgtagttttaagaggtacggcacatggcttaaaatccaacgattttacccag
ttggcaaaaacgggaaccgcacaggttccgcagggaaaagataattccatttttgttttg
attgctccggctgataaacctaaaattgtggttgcggcggtaatggaacacgccggattt
ggagcgacttgggcaggtccagcctcaacggtaatcgccgaaaaatttattacaggtgat
ctgaagcgtgaaaatctctacaaaaaaatgacttcctcaagctttatgcctgaatataaa
agacagtggattgctgatctgaagcgtaaaggtttatacaaagagccagtagattctgtt
aagcaaaaaaggatacaggacagcctgaaattcgtaaaagagcagaaagcaaaactgcag
aaacagatagacatcgaaacgaaaaataataaaacaaaacctgctaaacaatga
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