Chryseobacterium gambrini: PFY09_14800
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Entry
PFY09_14800 CDS
T08920
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19223
peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-]
Organism
cgam
Chryseobacterium gambrini
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgam01002
]
PFY09_14800
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
PFY09_14800
Peptidases and inhibitors [BR:
cgam01002
]
Cysteine peptidases
Family C40
PFY09_14800
Peptidoglycan biosynthesis and degradation proteins [BR:
cgam01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
PFY09_14800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
LysM3_LYK4_5
Peripla_BP_6
LysM2_NFP
LysM2_CERK1_LYK3_4_5
Toprim_2
vRNAP_dom
Motif
Other DBs
NCBI-ProteinID:
WBV51599
LinkDB
All DBs
Position
3242601..3244544
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AA seq
647 aa
AA seq
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MIKRFFILSSLCMVLGMSAQKSHTVVKGDTPYNIAKKYGLTVEELLKLNPKVKDGKLALG
DVLTVKNDKAASASSKTPVASKPVNNSQLGKIILQPKQTIYGITKQYRISETDLRKLNPE
LDAHMKIGDEITLPLESIKKYGGEQNVAVHTSPVEKPVETVAETHTTKASEDEYIVQQKD
NYYRISRQFNITKEELFALNPGLEEKGLKPGETIKIKKAGTKNSGADVFEENSNPKTKVD
SGNERSTNGTNTVADDDYVTYTVQQGDTVFSIVNKFGITIDELTALNPELSKGLKTGMVL
KIKKLDPAYVKKNGDALSVVMMLPFGYSTGETQYRTMALDFLTGAKLAIERNARNGQKLD
IKIVDSGNEASFRNSLTQINPDNTDLIIGPFFKSNVVDVLDFTKNQKIPIVAPFANSPEL
YNYSNLIIVETNDQTYADKIVEEVKSAFSDQKIYVVADSKKENANYIKAGLEKTLRNPNI
TIVNSSADIQLDKNMMTGQSAPVIAILASDSDTAGEAFANRVIALSKEVQGVKAFSMHYA
PVFEKKVDDLSQANLVYLMDRKINTDGSFEKEILAAYKNKYCKTPPKFAIVGFDIVNDML
TRENKKGEIFKQMNKVQTQLATKFEFVKSKANGAYVNTGYRVIRLVP
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaagaggttttttattctgtccagtttatgtatggttttgggtatgtctgcccag
aaatcgcataccgttgtaaaaggagatactccttacaacattgctaaaaaatacggactt
actgtagaagaattgctaaaactaaatccgaaagtgaaagacggtaaattggcgcttgga
gatgttcttacagtaaaaaatgataaggcagcttctgcttcatcaaaaacacctgttgct
tcaaaacctgtaaataattctcagcttggaaaaattattcttcagccgaaacaaaccatc
tacggaatcacaaaacaatacagaatatccgaaacagatctcagaaaactgaatcctgaa
ctggatgctcacatgaaaataggtgatgaaattaccctgcctcttgaaagcattaagaaa
tatggaggagagcaaaatgttgcggtacatacttctccggtagaaaaacctgttgaaact
gttgccgaaactcacactacaaaagcttcagaagacgaatatattgtacagcagaaagat
aattactacagaatttcaagacagttcaatattacaaaagaagaattgtttgccctgaat
cccggattggaagaaaaaggattaaagccgggggaaacgattaaaataaaaaaagcagga
acgaaaaactcaggagctgatgtttttgaagaaaattcaaatccgaaaaccaaagtagat
tcaggaaacgaaagatctacaaacggaacaaataccgttgctgatgatgattatgtaacg
tataccgttcagcagggagataccgttttctcgattgtgaataaattcggaatcacgatt
gatgaattaaccgctttgaatcctgaactttccaaagggcttaaaacaggaatggttctg
aaaattaaaaaactggatcctgcctacgtaaagaaaaacggagatgcattaagcgttgta
atgatgcttccttttggctacagcacaggagaaacacaatatcgtacaatggctttggat
tttcttacgggggcaaaacttgccattgaaagaaatgccagaaacggacaaaaattagat
ataaaaattgtggattccggaaacgaagcttcgttccgaaattcattaacccagataaat
ccggataatacagacttgattatcggtccgttcttcaagtcgaatgttgtagatgttctg
gatttcacaaaaaaccagaaaatcccgattgttgcgccatttgcaaactctccggaattg
tacaactacagcaacctgattattgtggaaaccaatgatcagacctatgccgataaaatt
gtagaagaagtaaaatctgcattctcggatcagaaaatttatgtggttgcagattctaaa
aaagaaaatgccaattatattaaagcaggtcttgagaaaacactcagaaatccaaatatc
accatcgtaaactcttcggcggatattcagcttgataaaaatatgatgacgggacagtct
gctccggtgatcgcgattttagcaagtgatagtgatacggcaggtgaagcttttgccaac
agagtaatcgctttatccaaagaagttcagggagtaaaagctttcagtatgcattacgct
ccggttttcgagaaaaaagtagatgatcttagtcaggcaaatcttgtctatttaatggac
agaaagatcaatacagacggaagcttcgaaaaagaaattcttgccgcttataaaaataaa
tactgtaaaacacctccaaagtttgccatagtaggttttgatatcgtgaatgatatgctg
accagagaaaacaaaaaaggagaaatcttcaaacagatgaataaggtacagactcagctt
gccacaaaatttgagtttgtaaaatccaaagcaaacggagcctatgtaaacacagggtac
cgcgttatcagattggttccttaa
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