Chryseobacterium gambrini: PFY09_19675
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Entry
PFY09_19675 CDS
T08920
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgam
Chryseobacterium gambrini
Pathway
cgam00061
Fatty acid biosynthesis
cgam00071
Fatty acid degradation
cgam01100
Metabolic pathways
cgam01212
Fatty acid metabolism
cgam02024
Quorum sensing
cgam04146
Peroxisome
Module
cgam_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PFY09_19675
00071 Fatty acid degradation
PFY09_19675
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PFY09_19675
09145 Cellular community - prokaryotes
02024 Quorum sensing
PFY09_19675
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgam01004
]
PFY09_19675
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgam04147
]
PFY09_19675
Enzymes [BR:
cgam01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PFY09_19675
Lipid biosynthesis proteins [BR:
cgam01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PFY09_19675
Exosome [BR:
cgam04147
]
Exosomal proteins
Exosomal proteins of breast milk
PFY09_19675
Exosomal proteins of breast cancer cells
PFY09_19675
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Phage_tail_C
Motif
Other DBs
NCBI-ProteinID:
WBV52487
LinkDB
All DBs
Position
4248404..4250173
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AA seq
589 aa
AA seq
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MNLAEAIILKNTEKHPIKSAIGFKKKDAGWKELSWKKFGEIVYKTANALKNAGIQENDKV
AIYSDNSSEWMIFDLAVLAIGAITVPIYSTNNAEQAEYIINDSEAKAILVGDQAQYDACL
EILKKESTSLQTIIISKKAVWIKKEFSSFYLEDFIAKSSPKLEFCKKEYEDIATLIYTSG
TTGTPKGVMLTHGNFIKAFDAHFEFFKFNNFEEELSLAFLPLTHVFERSWSLLCLYGGAR
VYFLEDPKNIANALEEVKPTMMCAVPRFFQKVYAGVLEKAEEGSSLKKKIFNWALETGSQ
TAELRRREQPVPFGLKIKENIAESLVFSKIKEKMGGRLWFLPCGGASLSPEVTKFFESVG
IHVTVGYGLTETTATLTAFPLTNFEHGSCGKPLPGVEIRIGENDEIQAKGNGIMKGYYKK
PEETQKVFTEDGWFKTGDAGTIDSKGNLTITDRLKDLMKTSNGKYIAPQQIENILTNNNF
IQQIVLIAEGRQFVSALVVPNFEFLKEYLKKNNIAFNNWEEIVKNEKVNDFYKDKIKELQ
IDLSDYEKVKKFTLMPSEFDINTGEITPTLKVKRNVVLKKYADLIEKMY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgcagaggcaattatcttaaaaaatacagaaaagcatcccataaaatctgcc
atcggatttaaaaagaaagatgcaggctggaaagaactgagctggaaaaaattcggcgaa
attgtgtataaaacagccaatgcacttaaaaatgcaggaattcaggaaaatgataaagta
gccatttattcggataactcttccgaatggatgatttttgatctcgcggtgttggcaatc
ggagccatcacggttccaatctattccaccaataatgcagaacaggcagaatacatcatc
aacgattcggaagcgaaggcaattttagtgggagatcaggctcagtacgatgcgtgtctg
gaaattttgaagaaagaaagtacaagtctgcaaacgattatcatttctaaaaaagcagtc
tggatcaagaaagaattcagcagtttttatctggaggattttatcgctaaaagttctccc
aaattagaattctgcaagaaagaatatgaagatattgccacgcttatctacacttccgga
actacaggaacaccgaaaggagtcatgcttacgcacggaaatttcataaaagcctttgat
gcgcattttgaatttttcaagtttaataactttgaagaagagctttctctggcattttta
cctttaacccacgttttcgaaagaagctggagcctgctttgcctttacggaggcgcaaga
gtgtatttcctcgaagatccgaaaaatattgccaatgctttggaagaggtaaaaccgacc
atgatgtgcgcggtgccgagatttttccagaaagtctacgccggagtgttggaaaaagca
gaagaaggttcatccttgaagaaaaaaatatttaactgggcattggaaaccggttcgcag
accgcagaattaagaagaagagaacagccggttccgtttggattaaaaataaaagaaaac
attgccgaatctttggttttcagtaaaattaaagaaaaaatgggcggaagattatggttt
ctgccttgtggcggagcttcattatctcctgaagtgacgaagttttttgaatcggttgga
attcatgtgacggttggctacggtttaacggaaactacggcaactttaaccgcttttcct
ttgacgaattttgaacacggaagctgcggaaaacctcttccgggcgtggaaatccgaatc
ggggagaacgacgaaattcaggcaaaaggaaacggaatcatgaagggatattacaaaaag
cctgaagaaacgcagaaagttttcacggaagacggctggtttaaaaccggagatgccgga
accatcgacagcaaaggaaatcttaccattacagaccgattgaaagatctcatgaagact
tccaacggaaaatacatcgcgccgcagcagattgaaaatattttaaccaacaataatttc
attcagcagattgttctgattgcggaaggaagacagtttgtttccgctttagtggttcct
aactttgaatttttaaaagaatatctcaagaaaaataatattgctttcaataattgggaa
gaaatcgtgaaaaacgagaaggtaaacgatttttataaagataaaattaaagaactgcaa
atagatttatcagattacgaaaaagtgaaaaaattcacattgatgccttcggaatttgat
atcaatacaggagaaattactccgacattgaaggtaaaaagaaatgtagtgcttaaaaaa
tatgcagatctcatagagaagatgtattaa
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