Chryseobacterium gambrini: PFY09_20100
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Entry
PFY09_20100 CDS
T08920
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cgam
Chryseobacterium gambrini
Brite
KEGG Orthology (KO) [BR:
cgam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgam03016
]
PFY09_20100 (truB)
Enzymes [BR:
cgam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PFY09_20100 (truB)
Transfer RNA biogenesis [BR:
cgam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFY09_20100 (truB)
Prokaryotic type
PFY09_20100 (truB)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
WBV52565
LinkDB
All DBs
Position
4358906..4359604
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AA seq
232 aa
AA seq
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MTAEDLQSGHIFLLDKPLDWTSFQAVNKMKYKLKREFDLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHQDISQITEEQIKTALEKF
VGEIDQTPPVFSAIKIEGKRAYDLARAGEEVEMKSRKTTIFYIDDVKIDLPLVSFTVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGEYKIEDATSDFLENDFRFNES
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgactgccgaagatttacaatctggacatatatttttattagacaaacccttggactgg
acttcttttcaggcggtcaataaaatgaaatacaaactcaaaagagagtttgatttaccc
aaaaaattcaaaattggtcacgcgggaactttagatccgcgtgcaacgggattattgatt
gtctgctgtggtaaattcaccaagaaaattcctgaaattcaggatgccccaaaagaatac
tggaccgaaataaaaatcggcgttcagacagaatcatacgatactgagaaacccgaaatt
ttacatcaggacatttcgcagattacggaggagcagataaaaacggcattggaaaaattt
gttggagaaatcgatcagactccgcctgttttttcggcaataaaaattgagggaaaaaga
gcgtatgatcttgccagagcaggagaggaggtggaaatgaaatcccgtaaaaccacgatt
ttttatattgatgatgtaaagattgatcttccactcgtaagctttacggtgggttgctcg
aaagggacttacattcgcagtttagctcacgatatcggacaggagttgggtgttggagcg
tatttaacgcaattaagacggacaaagatcggagaatacaaaattgaagatgccacgtca
gactttttggaaaatgattttagatttaacgaatcatga
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