Clarias gariepinus (North African catfish): 128505399
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Entry
128505399 CDS
T10780
Symbol
pparab
Name
(RefSeq) peroxisome proliferator-activated receptor alpha b
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128505399 (pparab)
03320 PPAR signaling pathway
128505399 (pparab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128505399 (pparab)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cgar03310
]
128505399 (pparab)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
128505399 (pparab)
Nuclear receptors [BR:
cgar03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
128505399 (pparab)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
128505399
NCBI-ProteinID:
XP_053331759
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Position
2:29751683..29777453
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AA seq
466 aa
AA seq
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MVDMESPYSPPSPLGDSVLNSPLYRDLVGAGDLQDISESMNEEALSNIDVSEYHSSGLCS
SSESSTVPDALTPASSPSSGVCGAVSGQEEFTSSSLNLECRVCADRASGYHYGVHACEGC
KGFFRRTIRLKLEYDKCERHCKIQKKNRNKCQYCRFQKCLAVGMSHNAIRFGRMPQSEKL
KLKAEILTGEREVENPQLADQKTLAKQIYEAYLKNFSMNKAKARTILTGKTNRPPFVIHD
METLHLAEQTLVAKMVSTAGGLLEKDAEVRIFHCCQCTSVETVTELTEFAKSVPGFCNLD
LNDQVTLLKYGVYEALFAMLASCMNKDGLLVAYGSGFITREFLKSLRRPISDMMEPKFQF
AMKFNALGLDDSDLALFVAAIICCGDRPGLLNVPYIERMQESIVHVLQLHLHNNHPDNLF
LFPKLLQKLADLRQLVTEHAQLVQEIKKMEDTSLHPLLQEIYRDMY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtagacatggagagcccctacagtcctccgtctcctttaggggactctgtgttgaac
agcccgctttacagggacttagtgggtgcgggagacctgcaagacatctcagagtccatg
aatgaagaagcactcagcaacatcgatgtgtccgagtaccactcctctggcctgtgctcc
agctccgagagctccacggtgccagatgccttgaccccagcctcgagtccatcttctgga
gtgtgtggggctgtatcgggacaggaggagttcacctcctcttctctaaacctggagtgt
cgcgtatgtgctgatcgagcctcaggatatcactacggtgtccacgcctgtgagggctgc
aaaggcttttttaggcgcacaatccgtctcaagctagaatatgacaaatgtgaacgccac
tgcaaaatccaaaaaaagaaccggaacaagtgccaatactgccgctttcaaaagtgccta
gctgtgggcatgtcccacaacgccattcgctttggccggatgccccagtccgagaagcta
aagctaaaggcagagatactaactggggagagggaggtggagaatcctcagttagctgac
cagaaaaccttggccaaacaaatctacgaggcttatctgaagaacttcagcatgaacaaa
gctaaagcacggaccatcctgacaggcaaaacaaacagaccacccttcgtaatccatgac
atggagactctgcatctagcggagcagactctggtggcaaagatggtcagcactgcaggt
ggactacttgaaaaggatgcagaagtaaggatcttccactgctgccagtgcacgtcggtg
gagacagtcacggagctcactgagtttgccaagtctgttccaggcttctgcaacctcgac
ctgaatgaccaggtaacactgttgaagtatggcgtgtatgaggcactctttgccatgctg
gcctcttgcatgaacaaggatggcttgctggttgcctatggcagtggcttcatcacaaga
gagttccttaaaagcttgcgacgacccatcagtgacatgatggagcctaagtttcagttc
gcaatgaagtttaatgcacttggactggatgacagtgatctagccctgtttgtggcagcc
atcatctgctgtggagatcgtccaggactgctgaacgttccatacattgagcggatgcag
gagagcatcgtccatgtgctgcagctccacctacacaataaccatccagacaatttgttc
cttttccctaaactgctgcaaaaactagctgacctgcgtcagttagtgacagagcatgca
caattagtgcaggaaatcaagaaaatggaggacacatcattgcatcctctgctccaggaa
atctacagggacatgtactaa
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