Clarias gariepinus (North African catfish): 128505546
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Entry
128505546 CDS
T10780
Symbol
fbxw11b
Name
(RefSeq) F-box and WD repeat domain-containing 11-B
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04114
Oocyte meiosis
cgar04120
Ubiquitin mediated proteolysis
cgar04218
Cellular senescence
cgar04310
Wnt signaling pathway
cgar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128505546 (fbxw11b)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
128505546 (fbxw11b)
04340 Hedgehog signaling pathway
128505546 (fbxw11b)
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128505546 (fbxw11b)
04218 Cellular senescence
128505546 (fbxw11b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128505546 (fbxw11b)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128505546 (fbxw11b)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
128505546 (fbxw11b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
128505546 (fbxw11b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_WDR19_1st
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
128505546
NCBI-ProteinID:
XP_053332024
LinkDB
All DBs
Position
17:complement(2112613..2126467)
Genome browser
AA seq
524 aa
AA seq
DB search
MEPDMEDKTELMNTSVMESHTGEISPKTTTVFKITNGPLSGSRKRPSEGNYEKEKDVCIQ
LFDQWSEADQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSF
LDARSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTTE
VPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLR
DNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNSGEVLNTLIH
HNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDDKYIVS
ASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRV
LEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRL
QFDEFQIISSSHDDTILIWDFLNVSTNGQMEGRSPSRTYTYISR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacatggaggacaaaacagagctcatgaacacctcagttatggaatctcat
actggagagatttctccaaagaccacaacagtatttaagatcaccaacggccccttgtca
ggctcgagaaagcggccatcggagggcaactacgagaaagagaaggacgtgtgcatccag
ctgtttgaccagtggtctgaggccgaccaggtggagtttgtggagcatctgatatcacgc
atgtgtcactatcagcacggccacatcaactcctacctcaaacccatgctgcagagggac
ttcatcacagcgctgccagctcagggtctggaccacatagcggagaacatcctgtcgttc
ctggatgctcgctcgctgtgttcggccgagctggtgtgtaaggagtggcagcgcgtcatt
tcagagggcatgctgtggaagaagctgatcgagcgcatggtgcggaccgacccgctctgg
aaaggcctgtccgagagacaccagtgggagaagtacctattcaagaaccgcactacagaa
gtcccgccgaactcttactaccgatctctgtaccccaaaatcattcaggacattgagacc
attgaggcaaactggcgctgtggacggcacaaccttcagaggatccagtgcaggtctgag
aacagtaaaggcgtctactgcctccagtatgacgacgacaagatcatcagcggcctccga
gacaactccatcaagatttgggacaagcagtctttggagtgtttgaagattctaaccgga
cacacagggtcagttctgtgtctgcagtacgacgagcgcgtcatcgtcaccggctcctca
gactccaccgtcagggtgtgggacgtgaactcgggcgaggtgctgaacactctgatccac
cacaacgaggccgtgctgcacctgcgcttctgtaacggtctgatggtgacctgctccaag
gaccgctccatcgccgtgtgggacatggcctcgcctactgatatcagcctgcgccgcgtg
ctcgtgggtcacagggccgccgtcaacgtggtcgacttcgatgacaagtacatcgtctct
gcctctggggaccgcaccataaaggtttggagcacgagtacgtgtgagtttgtacgcacc
ctgaacgggcacaagcgaggaatcgcctgccttcagtacagagaccggctcgtggtcagc
ggttcctcggacaacaccatcaggctatgggatatcgagtgtggtgcctgtttgcgggtt
ttggaaggacatgaggagctggtgcgctgcatccgcttcgacaacaagaggatcgtcagt
ggcgcctacgacggaaaaattaaagtatgggacctgcaggctgccttggatcctcgagcg
ccagctagcactctgtgtctacgaacactggtggagcactcgggccgcgtgttccggctg
cagtttgacgagttccagatcatcagtagttcccatgacgacaccattctcatctgggat
ttcttgaacgtgtcgactaacggacaaatggaagggcggtcgccgtcgcgcacgtatacg
tacatatccagatag
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