Clarias gariepinus (North African catfish): 128506023
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Entry
128506023 CDS
T10780
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4 isoform X1
KO
K06241
laminin, alpha 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128506023 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128506023 (lama4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_II
EGF_LMN_ATRN
Laminin_I
Laminin_G_3
Mating_N
Motif
Other DBs
NCBI-GeneID:
128506023
NCBI-ProteinID:
XP_053332378
LinkDB
All DBs
Position
2:complement(51715171..51752155)
Genome browser
AA seq
1871 aa
AA seq
DB search
MDRGRDMSSVVPLLVFFCMFSMLFAQQDPIYTVCARGFFLSEQDICLPCNCKGHALDCED
ITGICIGCQNHSTGDFCERCQDGYVLHVSPDGQHECRPCACPVATETNNFATHCEVRGVA
LRCVCQVGYAGHYCERCAPGYYGNPIRAGDSCKKCDCNGNSDPNLIFNECHNVTGRCLHC
YHNTAGDNCERCAPGYYGDAISAKDCHKCECNQCGTASCDDRTGVCHCKPGVTGQLCDRC
EDNHSGFSSCMGCRRCVCEAAALQTTCNKLTQSCQCRPGAGGRYCEHCLPGYWDYTHTGC
KKCDCREGNCDAHTGECLPEMSQVSECSVDCDECIWHLIGDVRQSNKTVDQLRNSVLNIS
TGAAAYDRLKYYNYTSHTLRVQFVGWRNKSAVMRKHTGELEEETVHLQTDTELLTHQEEG
VLSLGQQVDSDSLHSFTLAEMLAANLTSLNVLVEEMISDWVEYSVQHDVDPEQQKQKESE
AEHKLRHMRTLTLSPKHTLATQENAHTQQLLQQVRQMEKSVTQMETRLPPVSEPMKRFST
SLTHGQIHLHRAHDTLQQIHSTHTRNLLHLQRREAHKQRLLENYNAVNQTVMSANDVLEE
ATKGVADLGTMVTSVREHHAEVDGAAVEIQRKTDQLSKADESLVQRATEHAHELQRHAHE
LQQNLKRSDTHGFVQKALEASNVYDNIVKYINEADVIGGSALNMSNRTEDALDGLAPQLN
IVKRQSSDMFKETETLRSEYEEVETSVTDTKKYIEETRDMLQTSRSNLKELVNSMKTLQR
VQKLQSTQEAAQHALNHSAEVLGVITPIKEKVEEWDRNMRNNQYSTSAYQQAVDSARNTV
EGLSEIVPRLLTKLQVVEEKKPANVSTNIMRVRELIAQARSIASKVQVSMKFNGESSVEL
HPPADVDELKAVTSINLYVRVDPDLDGIEERFLLYIGSKNGNKDYMGVAIKNDNLVFVYN
LGGEDVEIPLSSKPVSSWPPVFNHVRVERLGRHGKVYLTVPSQGNVAEQKFIQKGEWDGT
ESLFHLDPRDTVFIIGGAPADIKLPPALSLAPFIGCIELASLNNEVISLYNFKKLHNMNV
AVSAPCPRYKLAFSQGRVASYLFDGSGYALVRNIERRARVSVVTRFDIEVRTVAQNGVLL
LMVNEDHFFVLEMKNGFLRLVYDFGFANGPIVLEGNLAKLQINDARYHEVSVIYHQSKKV
ILLVDRSFVKSTDNEKKTLPFNDIYIGGAPSDLLKSRSEFSPLIGLKGCVKGFQFQKKDF
NLLEEPGTIGISSGCPEESFMSRKAYFAGDGYLSSIASISPFSSFEGGMSFRTTEPSGLL
FYHRDGTEEFSLSLENGAVVLHSRGTKVKSRKHYSDGRPHFLVASITKQKYQLVVDDKDK
QDKKNSGSAPHTEGVKEFYYGGSPQSNILNFTGCISYAYISRQDRDIEAEDFQRYTENVG
VSLQDCPVERPPTTLRHTRSVRHTLHKTHPAPNTPAALHQVSRTEPALLLNVLEGQDDPQ
TTAEREATPCYLSPRPPAVRNSHYFSGDSWLAYDGIAEVIRERSEFSVSLRTHSAQGMVA
CVCGEGDEDFMALFLSKGKLVFTFGSAQHTLQLHTKHTHNDGRWHDVVFRRDGNRGLLLV
DGLTLMEDEVQIEDFYLNLQGALYVGGLPAGHANKHMKVKSGFSGCVRDLRLNGHFLSSV
PRSFGVTPCLEGKTEAGMFFFKEGGYTVLDHSLSVGGQLEVVMELRPRVTSALLLHFYIA
PEENLSVYLQHGQVFVQLNNETGGVYVSPQHSVCDGNWHRVKVVRDSSGLKLDVDGKQRR
VIRVRFPKQKHRVLVPVFIGGAPDDTLPVSMRMRSSYVGCVRNLSINQHSVNFKHASLVN
GVVSVDGCPAA
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atggacagagggagagacatgtcctctgtggttcccctcctggttttcttctgcatgttc
tccatgctcttcgcccaacaggatcccatttacactgtgtgcgcgcgcgggttcttcctg
agtgaacaggacatttgtttgccgtgtaactgtaaaggccacgccctcgactgtgaggac
atcactgggatctgcattggctgtcagaaccacagtacaggtgatttctgtgagagatgt
caggatggttacgtgctccatgtttctccggatggacagcacgagtgtcggccatgtgcc
tgccctgtcgccacggagaccaacaacttcgccacacactgtgaggtgaggggcgtggct
ctgcggtgtgtgtgtcaggtcggttacgctggacattactgtgagaggtgtgctcctggt
tactatggcaaccccatccgcgcaggtgactcgtgtaagaagtgtgactgcaacgggaac
tcagacccgaacctgatcttcaacgagtgtcacaatgtaacggggcggtgcctacactgt
taccacaacaccgccggggacaactgtgagaggtgtgcacctggttactacggcgacgcc
atcagcgccaaggactgccacaagtgtgagtgtaatcagtgtgggacggcatcatgtgat
gacaggacaggagtgtgtcactgtaaacccggagttacaggacagctgtgtgatcgctgt
gaggacaatcactctgggttcagtagctgtatgggctgtagaaggtgtgtgtgtgaagct
gcagctctgcaaacaacctgtaacaaactcactcagtcgtgtcagtgccgcccgggggcc
ggaggacgttactgcgaacactgcttacctggatactgggactacacacacaccggctgt
aagaagtgtgattgccgtgaggggaactgtgatgcccacactggagagtgtctacctgag
atgtcccaagtcagcgagtgcagtgttgactgtgatgagtgtatctggcacctgattggt
gacgtgcgtcagtccaataaaactgtggatcagctgaggaacagcgtcctgaacatctct
actggagctgcagcgtacgatcggctcaaatactacaactacacttcacacacactcagg
gtgcagtttgtaggatggaggaataaatcagcggtgatgaggaaacacacgggagagctg
gaggaggaaacagttcaccttcagactgacacagaactgcttacacatcaggaggagggt
gtgctgtcacttgggcagcaggtagacagcgactcgctgcacagcttcacattagccgag
atgctagcggctaacctgacttcgcttaatgtgctagtagaagagatgatcagtgactgg
gtggagtacagtgtgcagcatgatgtggatcctgagcagcagaagcagaaggagagtgaa
gctgaacacaagctgaggcacatgagaaccctgaccctgtcacccaaacacacactcgcc
acgcaggagaacgcacacacacagcagcttcttcagcaggtgcgtcagatggagaagagt
gtgacgcagatggagacacgtcttcctccggtcagcgaaccgatgaagcgctttagcaca
agtctcacacacgggcagatacatctgcacagggcacacgacacactgcagcaaatacac
agcacacacacgcgcaacctgctccacctacagcgcagagaggctcacaaacagcgtcta
ctggagaactataatgctgtcaatcagactgtcatgtcagccaacgacgtcttagaggag
gcgactaagggcgtggcagacttgggtaccatggttacgagcgtgagagagcaccacgcg
gaggtcgacggcgctgcagtagagatacagcgtaaaaccgaccagctctcgaaggctgat
gagagtttagtgcagagagctactgagcatgctcacgagctgcagagacacgcccacgaa
ctgcagcagaatctgaagcgcagtgatacacatgggtttgtacagaaagctctggaggct
tcaaacgtctacgacaacatcgtgaaatacatcaacgaggccgacgtgatcggggggagt
gcactgaacatgtccaacaggacagaggacgctctggacggtttggcgccgcagttgaac
atcgtgaagagacaaagcagtgacatgtttaaggagactgagacgcttcgctctgagtac
gaagaggtggagacgtctgtcactgacaccaagaaatacatcgaggagaccagagacatg
ctgcagacatcacgctccaacctgaaggagctcgtaaacagcatgaagaccctgcagaga
gtccagaagctgcagtccactcaggaggcagcacagcacgccctgaatcactcggctgag
gttctgggggtcatcaccccgattaaggaaaaagtggaagaatgggacaggaacatgagg
aacaatcagtactctacctccgcctaccaacaggctgtagactccgcccgcaacacagtg
gagggtctgtcagaaatcgtccccaggttgttaacaaagctgcaggttgtggaagaaaag
aaaccagccaacgtgtccaccaacatcatgagggtccgagaactcattgctcaggctcgc
agcatcgccagcaaggtgcaagtatcaatgaagtttaatggggagtcctcagtggagctc
cacccacctgctgatgtagacgagttgaaggctgtgacctccattaacctttacgtgcgt
gtggaccccgatttggacggcatcgaggaacgcttcctgctctacattggaagcaaaaac
ggtaataaggactacatgggtgtggctataaagaatgacaacctggtgtttgtgtataat
ttgggtggagaagatgtagaaattccacttagctccaaacctgtgagttcctggcctcct
gtatttaaccatgtgagagtggagagactgggtcgccatggtaaggtctatctaacagtc
cctagtcagggcaatgtggctgagcagaagtttatacagaaaggggagtgggatgggact
gaatctctcttccacctggaccccagagatacagtgttcatcataggaggagctccggca
gacattaagctcccccctgctctgagtttagctccatttattggctgtattgaacttgct
tctctcaataacgaggtcatcagtctgtacaacttcaaaaagctgcataacatgaatgtt
gccgtgtctgcgccctgtcccaggtataagctggcattctctcagggccgggtggcaagt
tacctgttcgatggttcaggttatgcactagtgaggaacattgagaggcgggcccgggtc
agtgtggtcacgcggtttgacatagaagttcgcacagtggctcagaacggggttctgctg
ctcatggttaacgaggatcatttctttgtgctggagatgaagaacgggtttctgcgcttg
gtttatgactttgggtttgctaacggtcccattgtgttggaagggaacctggccaaactg
cagatcaatgatgccagataccatgaggtgtcagtgatctaccaccagtctaagaaggtt
atcctcctggtagacaggagttttgtaaaatctacagataatgaaaagaaaactctgccc
tttaacgatatttacatcggaggagcaccgtcagacctgctgaagtcacggtctgagttc
tcacctctgattggactgaaaggatgcgtaaaagggtttcagttccagaaaaaagacttt
aacctgctggaggaaccaggaaccattggcatcagcagcggctgtccagaggagtccttt
atgtcacgtaaggcctactttgcaggtgatggttatttaagttccatagcgagtatctct
ccattcagctcgtttgaaggaggaatgagcttcagaacaaccgagccatctggacttctg
ttctaccacagagatgggacggaggagttctctctgtctctggagaacggtgcagtcgtc
cttcactccagaggaactaaagttaaatccaggaagcactacagtgacggacgacctcac
ttcctggtcgcctccataaccaagcagaagtaccagctggtggtggatgataaagacaag
caggacaagaagaactcgggttctgcaccacatacagagggagtgaaggagttctactat
ggaggatctcctcagagcaacatccttaacttcaccggctgtatcagttacgcttacatc
agcaggcaggaccgtgatatcgaggcggaggatttccagcgttacactgagaatgtgggc
gtgtccctgcaggattgtcctgtggagagacctcccactactcttcggcacacacgctct
gtacgacacactttacacaaaacacaccctgctccaaacacacctgcagctttacaccag
gtgagcaggaccgaacctgcgctgctgctgaacgtcctggaaggacaggatgaccctcag
actactgcagagagggaggccacaccctgctacctctcaccccgcccaccagcagtgaga
aactcccactattttagtggtgacagttggcttgcgtatgatggcattgctgaggttatt
agagaaaggtcagagttctcagtatcactaaggacacactcggcgcaggggatggtagcg
tgtgtgtgtggtgagggtgatgaagacttcatggcgctcttcctgtctaaagggaaactc
gtctttacgttcggctccgcgcaacacacactgcagctccacaccaaacacacacacaac
gatggacgctggcatgacgtggtgttcaggagagacggtaacagagggctgctgcttgtg
gacggtctgacgctgatggaggatgaagttcagatcgaggacttctacctgaacctgcag
ggggcactgtatgtgggcggccttccagcaggacacgccaacaagcacatgaaggtgaag
tccgggttctcagggtgtgtgagagacctgcgtctgaacggccacttcctctcgtctgtt
ccgcggagtttcggggtgacgccatgtttagagggaaagactgaagctggaatgtttttc
tttaaggagggaggatatacagtgctcgatcactctctgagcgtgggcggtcagttagaa
gtggttatggagctccgcccccgtgtgacctcagcactgttactgcacttctacatcgca
cctgaggagaacctcagcgtctacctgcagcatggacaggtgtttgtgcagctgaacaat
gagacaggcggtgtgtatgtttccccccaacacagcgtgtgtgatggcaactggcacagg
gtcaaagtggtgagggacagcagtggactgaagctggatgtggacgggaagcagaggcgt
gtaatcagggtgagatttccaaagcagaagcacagagtgttagtgccagtgttcatcggt
ggagcaccagatgacacacttcctgttagcatgaggatgaggagtagctatgtgggctgt
gtgaggaacctgtccatcaaccagcactctgttaacttcaaacacgcatcgctcgttaac
ggggtcgttagtgtggacggctgtcctgcggcctga
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