Clarias gariepinus (North African catfish): 128506141
Help
Entry
128506141 CDS
T10780
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128506141
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128506141
Endosome - Golgi transport
Rab GTPases and associated proteins
128506141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
128506141
NCBI-ProteinID:
XP_053332426
LinkDB
All DBs
Position
2:complement(17352723..17381422)
Genome browser
AA seq
1225 aa
AA seq
DB search
MWISPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTLDVVLDSSARVAPYR
ILHQTGDSQLFWSIACGSSRKEITEHWEWLEANLLQTLSIFDNDEDITTFVKGKIQGIIA
EENKSRQAQEDEDCGKFREAELKMRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSVN
HLCFYSFLLGKEVTLIVQWTDVTQLDKNATLLFPESVRVSTRDTEHYFSMFLNINDTFKL
MEQLANIAMRQLLDNEGFAADHSLPKPCKTLKNVSALKRDLDARAKNERYRALFRLTKEE
RLDGHTDCTLWTPFAKMHVVGQMFVSNNYICFASREEDLCQLIIPLREVSIVEKADSSSV
LPSPLSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDRLCSMTGQSESPSPTTPTSLP
SMPSVLGSSEVIQERYYSSSLPTAKQGLLHIYQKGRPEDLGPKATKEKMKEESWNIHFFE
FGRGVCMYRTSKTRDLVLKGIPESLRGELWLLFSGAQNEMVTHSGYYAELVEQAMGRCTL
ATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYAYRNPGIGYCQAMNIVTSVLLLYCT
EEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQELGVISTISL
SWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVSLAVLHANMEKLLNCTDEGEAMTILG
RYLDNVVNKQTVSPPIPHLHALLTSGDEPPPEIDVFDLIKTSYEKFGSLRADVIEQMRFK
QRLKVIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVLFKAKHIMSCYWGASSSAAERHD
PSLPYLEQYRIDCGQFIQLFSALAPWSCGMHTSTLAARLFRVLDRNKDSLINFKEFVTGL
SGMYHGDMTEKLKLLYKLHMPPALCPEEAESALEATHFFTDDDTPQDPPSLSHLDFLVQE
VTSGEEAKEIADAGVDPEDKKEDKVKDYKYYLRMWAKEREPKKETIKDLPRMNQEQFIEL
CKTLYNMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNGSKKSDAQAQAGGEIPAKE
DSFGEAGCGQSPVSKALEEAQLETLPPPANGSDEDAKDDTSISSYSVVSAGSLQCEDIAD
DTVLIGSALGGAGSGSGSRRGSAPDGDWSISFEQVLASLLTEPPLVNYFEKKHDIRFKMA
ICRSQRAVERQISSSSDHELTQLST
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgtggatcagcccggaggaggtgctgctggctaacgcgctgtgggtgagtgagagggcc
aatcccttcttcatcctgcagcggagaaagggacacggaaaaggaggaggcatcaccggt
cttctggttggcacgctggacgtggtgttagactccagtgctcgtgtggctccatatcga
atccttcaccaaacaggagactctcagctcttttggagcattgcctgtggctcatctcgc
aaggagataacggaacactgggaatggctggaggccaatttactgcagactctctccatt
tttgacaatgatgaagacatcactacttttgtcaagggcaagatacagggcatcattgct
gaggagaataagagccgtcaggctcaagaagacgaggattgtgggaagtttcgggaggcg
gagctgaagatgcggaagttgtttgggatgccagaggaagagaaactggtgaactattac
tcatgcagctactggaagggaagagtgccacgtcagggctggctctacttgtctgtcaat
cacctgtgcttctactcctttctgcttggaaaagaggtgacattaatagtgcagtggacg
gatgttacccagttagataagaacgccacgctgttattccccgagagcgtgcgggtgagc
actcgggacacagagcactacttctccatgttccttaacatcaacgacacattcaaactg
atggagcagctggctaacatcgccatgaggcagctcctggataatgagggattcgctgca
gaccactcgctccccaaaccctgcaagaccctcaaaaatgtttctgcacttaaaagggac
ctggacgcacgggcaaaaaatgagcgatacagagctctgttccgcctgacgaaggaggaa
cgactagacggtcatacagactgcactttgtggacgcccttcgctaagatgcatgtggtt
ggacagatgttcgtctctaacaattacatttgttttgccagcagagaggaggacctgtgt
caactcatcataccacttagagaggtgtcaatagtagagaaagctgacagcagcagtgtt
ttgcctagtcctctctccatcagcactaaaaacaagatgaccttcctgtttgccaacctc
aaagatcgtgacttccttgttcagcgcatctcagacttcctgcagcgaacgcctgacaga
ctctgtagcatgactggacaatctgagagtccaagtcccaccacccctacgtcacttcct
tcaatgccgtcagtcctggggtcaagcgaggtcattcaggaacgatactacagctctagc
ctccccacagccaagcagggtcttctccacatctaccagaagggccgccctgaagacctg
ggacccaaagcgacaaaagagaaaatgaaggaagaatcctggaatattcacttttttgag
tttggaagaggtgtgtgcatgtaccgcacgtctaagactcgagacctggtcctgaaaggg
attcctgagagtctgagaggagagctgtggctgctgttctcaggtgctcagaatgagatg
gtgactcactctggatactatgcggagctggtggagcaggccatgggcaggtgcacttta
gctacagaagagattgagagagatttacatcgctccatgcctgagcaccatgccttccaa
aatgagatgggaatcgctgctcttcgacgggtactcactgcatacgcgtaccgcaacccg
ggcattggctactgccaggctatgaatatagtaacgtcggtgctgctgctgtactgtact
gaagaggaggcattctggttactggtggctttgtgtgaacggatgctgcctgattattac
aacaccagagttgtaggagctctggtggatcagggtgtgttcgaggagctgacacgggag
tgtttgccgctgctgtatgagcacatgcaggagctcggcgtgatctccaccatctccctg
tcctggtttcttacactttttttgtcagtcatgccgttcgacagtgctgtgttactggtg
gattgcttcttctacgagggaatcaaagtcatctttcaggtatcattggctgtgttacat
gctaacatggagaagttgttaaactgcacagatgaaggagaggctatgaccatacttgga
aggtatctggataatgttgtgaacaaacagacagtgtctccacccatcccccacctgcat
gccctgttaaccagtggagacgagccgccaccggagattgatgtatttgatctcattaag
acgtcatatgagaagtttggaagcttgcgtgctgatgtcattgagcagatgaggttcaaa
cagaggttaaaagtcatccagtctttagaggatacagctaagaggagtgtggtgagggcc
atcatgaccgactcagcctttagtattgaagagctggaagagctgtatgtcctgttcaag
gccaaacacattatgagctgttattggggtgcgagtagctctgctgcagagcgtcatgac
ccgagtttgccctatctcgagcagtaccggatcgactgtggccagttcattcagcttttc
tctgctttggccccttggagctgcggcatgcacacttctacactcgctgcccgcttattt
cgtgtccttgaccgcaacaaagactccctcatcaactttaaagagtttgtcacaggcctg
agtgggatgtatcatggcgatatgactgagaaactgaagctgctttataaattacacatg
cctccagctttgtgcccagaagaggcagagtctgcacttgaggccactcacttctttact
gatgatgacacaccacaggatcctccctccttgtctcatctagacttcctggtccaggaa
gtcacctcaggtgaggaagctaaggagatagctgatgcaggagtagatcctgaagacaag
aaagaggataaagtaaaggactataagtattacttgagaatgtgggctaaggaaagggaa
cccaagaaggagactattaaggacctgccgagaatgaaccaggagcagtttatcgagctg
tgcaagaccctctataatatgttcagtgaggaccctctggaacaggagctctatcatgcc
attgctacagttgccagcttattactgcgcattggagaagtgggcaaaaagtttaccaac
aacggtagtaagaagtctgatgcacaggctcaggcaggaggagagattccagcaaaagag
gacagttttggtgaggctggctgtggacagtccccggtgtcaaaggccctggaagaggcc
caactagagactctgcctcctccagccaatgggtcggacgaagatgcgaaggacgacacg
tccatttcatcctattctgtggtcagcgccggttctttgcagtgtgaagacattgcagat
gatacagttctgattggaagtgcactgggtggtgctggaagtgggagtggcagtaggcgt
ggcagtgcgccggatggtgattggtcaatatcttttgagcaagtgcttgcatcgttgctg
accgaaccgcctctggtaaactactttgagaagaagcatgatatcaggttcaagatggct
atctgtaggtctcagagggctgtagaaagacagatcagttcatccagcgaccatgagcta
acccagctctccacttga
DBGET
integrated database retrieval system
