Clarias gariepinus (North African catfish): 128506177
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Entry
128506177 CDS
T10780
Symbol
thumpd1
Name
(RefSeq) THUMP domain-containing protein 1
KO
K06963
tRNA acetyltransferase TAN1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128506177 (thumpd1)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
128506177 (thumpd1)
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Gene cluster
GFIT
Motif
Pfam:
THUMP
Motif
Other DBs
NCBI-GeneID:
128506177
NCBI-ProteinID:
XP_053332470
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All DBs
Position
18:complement(1607995..1612506)
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AA seq
418 aa
AA seq
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MSESVQDERRRNKRRYGGPQGGAKRRRGGRELEAGMQGILITCNMNERRCTAEAYSLLNE
YADQLYGPEQLTDTKDSGSSSEDDVEAALQKEVKQFHSSTERQQRRFTAVESGANNVLFI
RTHNIDPAQLVHSILQDLYSTRRLKSRVILRMLPVCGSCKAFPEDMLKFLNSFLQPWFLS
PNQASYQICFKARNNNNSKRDDIIKSIAGLVNQLNPNNKVDLTDPELSIIIEVIKSVCCV
SVIRDYKRFRKYNLQEVAKGPANQESPEQEVTKGPANQESTQQEVTKGPVNQESPQQEVT
KAPANQESPEQEVTKGPANQESTQQEVTKGPANQESSQQEVTKAPANQESPQQEVTKGPA
NQESPQQEVTKSPDNQESPQQEVTKGPANQESTQQEVTKGPANQESLQQEVGIKEVCQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagtgtgcaggatgagaggaggaggaacaagaggaggtatggaggtccacag
gggggcgctaagaggaggagagggggcagggagctggaggcgggcatgcagggcatcctc
atcacctgtaacatgaacgagcgccgctgcaccgccgaggcctacagcctgctgaacgag
tacgcagaccagctgtacgggcctgagcagttaacagacactaaagacagcggcagcagc
agtgaggatgacgtagaggcggcgctgcaaaaggaggtgaaacagttccactcgtctaca
gagagacaacagagacgctttactgcagtcgagagcggagcaaacaacgtcctgttcatc
cgcacacacaacattgatccggctcagctggtgcactccatcctgcaggatctctacagc
actcggaggttgaagtcgcgggtgattctgcgcatgttgccggtgtgtggctcatgtaaa
gcgttccctgaagacatgctgaagttcctgaactcgttcctgcagccctggttcctctcc
ccaaaccaggcctcctaccagatctgcttcaaagctcgcaacaataacaatagcaagagg
gacgacatcatcaagagcatcgctggtttggtgaaccagttaaatccgaataacaaagtg
gacctgaccgatccggagctcagcatcatcatcgaggtgataaagtcagtgtgctgcgtc
agcgtgatccgagactacaaacgctttcgaaaatacaacctacaggaagtggccaagggc
ccggccaatcaggagtctcccgaacaggaagtcacaaagggcccggccaatcaggagtca
acgcaacaggaagtcacaaagggcccagtcaatcaggagtcaccccaacaggaagtcaca
aaggccccagccaatcaggagtcacccgaacaggaagtcacaaagggcccggccaatcag
gagtcaacgcaacaggaagtcacaaagggcccagccaatcaggagtcatcccaacaggaa
gtcacaaaggccccagccaatcaggaatcaccgcaacaggaagtcacaaagggcccagcc
aatcaggaatcaccgcaacaggaagtcacaaagagcccagacaatcaggagtcaccccaa
caggaagtcacaaagggcccagccaatcaggaatcaacacaacaggaagtcacaaagggc
ccagccaatcaggagtcactccagcaggaagtgggaataaaagaagtatgtcagtag
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