Clarias gariepinus (North African catfish): 128506219
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Entry
128506219 CDS
T10780
Name
(RefSeq) SLIT and NTRK-like protein 1
KO
K25832
SLIT and NTRK-like protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128506219
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_14
Toxin_11
LRR_9
Motif
Other DBs
NCBI-GeneID:
128506219
NCBI-ProteinID:
XP_053332534
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Position
18:complement(23003964..23008136)
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AA seq
689 aa
AA seq
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MLLWIVLLKAALCAALGNSTSDVCKEEICSCSAIEGDLHIDCEKRGFSNLQHLTGPSSQF
YHLLLHGNSLSRLFPNEFANFYNAVSLHLENNGLHDIVPGAFLGLQLVKRLHINNNKIRS
FKKNTFLGLDDLEYLQADFNLLRDIDPTVFRDLSKLEVLILNDNLISALPTNIFQHVPIT
HLDLRGNRIKTLPYEGVLEQIPGIVEVLLEDNPWDCNCDLLSLKQWLENIPQRALVGRVV
CEAPARLQGNELNETAESELCPSKDGADSSLAAPPTQDETSELDSLPSPTSTTSKIAGVT
EKNAQNNKGRPKARENWQLKTPTAIASGTSDVTCPQTCICKPVGASQGLGVNCEGKKLES
VLNLRPKPLGAHELNLRDNNIHAVKRNQFRGYTNLNLLDLGGNNIKTIENGTFQNLSELR
WLYMDKNYLDTVMAEMFVGLQNLEYLSLEFNDIQLIIAGAFSPMPNLRVLFLNNNLLKSL
PADVFLGISLSKISLHNNYFTHLPLSGVLDQLSSIIQIDLHGNPWDCTCSIVPLKQWAEK
MAPDVIVSDLKCESPEEFWKQDFRRIRMDLICPELFEQVSPTLASKNGTTGMDSDTGTRP
GSYPEPSRVSISVLVPGLLLVFVTSAFTVVGMLVFVLRHRKRSKRRDGNSSASEINSLQT
VCDSSYWHGAAYHADHRSYDCGAHSLSDK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggattgtgttgctgaaggcggctctttgtgcagctctcgggaacagtacg
agcgacgtgtgcaaggaggagatctgctcatgcagtgcgatagagggtgatttgcacatc
gactgcgaaaagcgcggcttcagcaacctgcagcacttgactggtccaagctcgcagttt
tatcacttgctgctgcatgggaattccctgtccagactgtttcccaatgagttcgccaac
ttctacaatgcagtcagcttgcatttagagaacaacggcttgcacgatatcgtccccggc
gccttccttggcctgcagctggtcaagcgtctacatataaacaacaacaagatccggtct
tttaaaaagaacacttttcttggtttggatgatttggagtatctccaagctgattttaac
cttttaagagacattgatcccactgtttttagggatttgagtaaattagaggtcttaatt
ctgaatgataatctaattagtgcacttcccactaacattttccagcatgttcctataacg
catcttgacctgcgtgggaaccggataaagacgttgccttatgaaggagtcttggaacaa
attccggggatagtggaggttttgttggaggacaatccatgggactgcaattgtgacctt
ctttctttgaagcagtggcttgaaaacatcccacaacgggcacttgttggccgggtggtt
tgcgaagcacctgcgcgtcttcagggcaatgaactcaacgagacagctgaatctgaactc
tgcccttccaaagatggtgctgattccagtttggccgcacctccaactcaggacgagacc
tcagaattggattctcttccttctcctacatccacaacatccaaaatagctggagtgaca
gaaaaaaatgctcagaacaacaagggccgccccaaagcaagggaaaactggcagctaaag
acaccaacagcaatagcatcaggcacaagtgatgttacttgtcctcaaacatgcatttgc
aagccagttggtgctagtcagggacttggggtgaactgcgaaggtaaaaagttggagagc
gtcctcaatctgagacccaaaccacttggtgcacatgagctaaatctacgtgataacaat
atccatgcagtgaaaagaaaccagtttcggggttacacaaatctgaacctgcttgattta
ggtggaaacaatataaaaaccattgagaatggcactttccaaaacttgagcgagttgcgg
tggctttacatggacaaaaactatctcgatacagtcatggcggagatgtttgtgggactc
caaaaccttgaatatctcagtttggaatttaatgacatccagctcatcatagctggagct
tttagtccaatgcctaacctgcgggtgctgttccttaacaacaatttgttaaagtcgcta
cctgcggatgtctttctgggcatctccttgtctaaaataagcctgcataacaattatttc
acccatcttcccttaagcggtgtcctggatcagctcagctcaattatccaaatcgacttg
catggtaacccgtgggattgcacatgcagcattgtgccactgaaacagtgggccgaaaaa
atggcacctgatgtaattgtaagtgacctaaaatgtgagtcaccagaggagttctggaag
caggatttccgtcggatccgaatggacctaatatgcccagaacttttcgaacaggtttca
ccgaccttggcgtctaaaaatggtactactggtatggattctgacacagggacacgtcct
ggatcatacccagagccaagccgagtctcaatttcagtcctcgtgcctggattgctgctt
gtgtttgtcacttctgctttcactgttgtcgggatgctagtttttgtcctgcgtcaccgt
aaaaggtccaaacggagagacgggaactcctcggcatctgagatcaactctttgcagaca
gtttgtgactcatcttattggcacggcgctgcttatcatgctgatcacaggagctacgac
tgcggtgctcactcgctttctgataaataa
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