Clarias gariepinus (North African catfish): 128506221
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Entry
128506221 CDS
T10780
Symbol
msx1b
Name
(RefSeq) homeobox protein MSH-B
KO
K09341
homeobox protein MSX
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128506221 (msx1b)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
128506221 (msx1b)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
128506221
NCBI-ProteinID:
XP_053332537
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Position
18:17390017..17391946
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AA seq
269 aa
AA seq
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MTSPKGTAPFEASPRDKTDSESEESRAAEEKSKPSRHPFSVESLISKQNTCRSPRSPPPP
PAAAPAPPAPFPEHLGQYSHSQRTYFPQKSQVSAETFNHHVSDCLIDESEDSSDKEQSTW
LKSPTFSSPQRAASPPSTCHLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEF
SSSLSLTETQVKIWFQNRRAKAKRLHEAELEKLKLAAKPALPAALALPFSLAAHAPPAMY
GAAAASALPRPSLAVPAIFGSPYGMYYLS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcctaagggaactgctccgtttgaagcctcgcctcgcgacaaaacggactcc
gagagcgaggagagcagagccgccgaggagaagagcaagccgagccgccacccgttcagc
gtcgagtcgctcatctccaagcagaacacctgcaggagtccgcgctctcctcctcctcct
cctgctgctgctcctgctcctccagcgcctttcccagagcacctgggccagtactctcac
tctcagaggacttacttcccacagaaaagtcaggtctcagctgaaacctttaaccatcat
gtctcggactgtctaatcgacgagagcgaagactcgagtgacaaggaacagagcacttgg
ctgaagagcccaactttctcatcaccgcagagagctgcaagtcctccttcgacatgccac
ctgcgcaagcacaagaccaaccgcaaaccgcgcaccccgttcaccacggcgcagctgctg
gcgctggagcggaagtttcgccagaagcagtacctgtcgatcgccgagcgcgcggagttc
tccagctctctgagcctgaccgagacgcaagtgaagatctggttccagaaccgacgcgcc
aaggccaagcggctgcacgaagccgagctggagaaactgaagctggccgctaaacccgca
ctgcccgccgcgctggccttgcctttctctctggccgcgcacgcgcctccagccatgtac
ggcgccgccgccgcgtccgcgctcccgcgcccgagcctcgccgtgcccgcgatcttcggc
tcgccttatggaatgtattacttatcctaa
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