Clarias gariepinus (North African catfish): 128506236
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Entry
128506236 CDS
T10780
Symbol
itga6b
Name
(RefSeq) integrin alpha-6b isoform X1
KO
K06485
integrin alpha 6
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04518
Integrin signaling
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128506236 (itga6b)
04514 Cell adhesion molecule (CAM) interaction
128506236 (itga6b)
04518 Integrin signaling
128506236 (itga6b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128506236 (itga6b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128506236 (itga6b)
04810 Regulation of actin cytoskeleton
128506236 (itga6b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128506236 (itga6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506236 (itga6b)
04515 Cell adhesion molecules [BR:
cgar04515
]
128506236 (itga6b)
04090 CD molecules [BR:
cgar04090
]
128506236 (itga6b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128506236 (itga6b)
Exosomal proteins of breast milk
128506236 (itga6b)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128506236 (itga6b)
CD molecules [BR:
cgar04090
]
Proteins
128506236 (itga6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
DUF11
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
128506236
NCBI-ProteinID:
XP_053332562
LinkDB
All DBs
Position
18:complement(13499215..13532103)
Genome browser
AA seq
1086 aa
AA seq
DB search
MARYRTLTTLCLLCLMECVLISAFNLDTENVIRKTGEKDSLFGFSLALHRQLNPSDKRML
LVGAPRAKKISGQQSKITGGLYKCDMNPASSACDRIVFDNSEDLTKESKDNQWMGVTVQS
QGPGGKIVTCAHRYQKRQFTNTPQESRDITGRCYVLNEQLEIDESTSDEGGDWSFCEGRI
RGHERFGSCQQGLSVTFTKDYHYIVFGAPGGFNWKGVVRLEQRNNTLMEMGYYDDGPYEV
KYITPEGLDDVAVPANSYLGFSLDSGKMLTKKGELTIVAGAPRANHSGAVVLLKKMAGSA
TDLVTEYIIEEEGLASSFGYELAVVDLNGDGWQDLVVGAPQFFVKDGDIGGAVYVYINQK
GDWDKRITTRIDGAKNSMFGLAIENLGDLNLDGFNDVAIGAPYDDDGSGNVYIYHGSKNG
LDKEPAQVLKGKDLNIKMFGYSLAGNMDLDNNQYPDLAIGSLSDTVVMYRARPVVNIEKM
VTTTPKEIDLTKKNCGDNICIKVDACFKFTSNSKNYRPVLKIKYSIQVETKRKEDGLPSR
AVFVPPSPSDTSYESTGTIDLIKENQQMCVSKKLQLQDNLRDKLRSLPIEVNVEIVKPSG
RKKRQSTLSELSPVLAASQPLRSEVNFVKEGCGSDLQCQSNLKLECKLCSREQNQDVFKP
LSLENGLPVISLSNQKDIALEVKVTNKGGDDAYESVLTASFPDSLSYSAVRTKSTDKQIF
CVANQNGSKAECDLGNPFKKDSEVVFYIILSTGGISVDTSEVEVKLEVKTTSQQAPLLIT
QKAKVLIELLLSVSGVAKPSQLEFSGKVLGESAMKSESDIGSQIDYEFRVINLGKPLKSF
GTASLNIDWPMNTATHKWLLYLMKITTTGTDNIPCTPNKVNPLSLSQSRTKREIKDQDDG
TGDKGVLSSLFSDKRTSKVLTCGDGASCVKLQCSLQGLDSNAVIALRARLWNGTFIEDYA
ELSYVDIIVKASLSLTSSSKNVKLTNTDTQVRVTVFPVRKAAQYGGLPWWIILVAILLGL
LLLGLLVFLLWKCGFFKRSKYDDSVPRYIAVRIKKDERTHPPGKEQPASMEKKQWMTSWN
ENESYS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttaccggactcttacaacactctgtctcctgtgtctaatggaatgcgtcttg
atttccgccttcaacctggacacggagaacgtgatcaggaaaaccggggaaaaggacagc
ttgttcgggttctcactcgccctgcaccgacaactcaacccgtctgataaaagaatgctg
ctggttggtgctcccagggcgaagaaaatatccggtcagcagtcaaagataacaggaggc
ttgtacaagtgcgacatgaaccctgccagctctgcctgcgacagaatagtttttgacaat
agtgaggacctgacaaaggagagcaaagacaaccagtggatgggagtcacagtccagagt
caaggacccgggggcaagattgtgacctgtgcgcatcgctaccagaagagacagtttact
aacacgccgcaggagtcccgggacataacgggtcgctgctacgtgctcaatgagcagctg
gagatcgatgaaagcacaagcgacgagggtggagactggagcttctgcgagggacgaatc
aggggtcatgagcggttcggctcctgccagcaaggcctctcggtcaccttcaccaaggac
taccattacatagtgttcggagcacctggaggcttcaactggaaaggtgttgtccgcttg
gagcagaggaacaacacgctgatggagatggggtactacgatgatgggccatacgaggtc
aaatacatcacgcctgaaggccttgacgatgtggccgtccctgctaatagctatttagga
ttctctctcgactctggtaagatgctgactaagaaaggtgagctgaccatcgtcgctgga
gccccaagagccaatcacagtggagctgtagttctgttgaagaagatggcgggttctgct
acggaccttgtcactgagtacatcatagaagaagaaggcctggcctcgtctttcggctac
gagcttgcagtggtcgatttgaatggagatggatggcaggatcttgtagttggggctcct
cagttcttcgtgaaggacggtgatattggcggcgctgtttacgtctacatcaatcagaag
ggagactgggacaagaggatcacaactagaatagacggagccaaaaactccatgtttggg
ctggctattgaaaaccttggcgaccttaacctggatggatttaatgatgtggctattgga
gctccatatgacgatgatggatcaggaaatgtctacatctatcacggctcaaagaacggc
ctcgataaggaacctgctcaggtgctgaaaggaaaagacctaaatattaagatgtttggt
tattctttagctggtaacatggatttagacaacaaccagtatccagatctggctattgga
tctctctcagacactgtggtcatgtacagagcaaggccagtggttaacatagaaaagatg
gtcacaaccacccccaaagagatagacctcactaagaagaactgcggtgacaatatttgt
attaaggtggatgcgtgtttcaaatttacctccaattccaaaaactacaggcctgtcctt
aaaatcaaatactccatccaggtggagacgaagaggaaggaggacggacttccgtctcgt
gctgtttttgtcccaccgtcgccctctgacactagctatgagagtacaggaacaatagat
cttataaaggagaaccaacaaatgtgtgtctccaaaaaacttcaacttcaggataactta
agggataagctgagatctctgcccatagaggtgaacgtggagatcgtaaagccatcagga
cgcaagaagaggcaaagcactctctcagagctgagccctgtcctcgctgcgagccaaccc
ctccgttctgaggtcaattttgtgaaagagggttgcggctccgacctgcagtgccagagt
aacttaaagctggagtgcaaattatgctctcgagaacaaaaccaagacgtcttcaaacca
cttagtcttgaaaatggattgccggtcatttcactcagcaaccagaaggacattgcgctg
gaggtcaaggtgacgaataagggtggagacgatgcgtatgagtcagttctaaccgcatcg
ttccccgactccctgtcttactccgcagttcgcaccaagtctactgacaagcagatcttc
tgcgtggctaatcagaacggttcaaaagctgaatgcgatcttggaaatccttttaaaaaa
gactcagaagtagtattttacattattctgagcaccggtgggatttcggtggatacgtct
gaagtggaagttaaacttgaagttaaaacgacgagtcaacaagcaccactgttaataaca
cagaaagctaaagttttaattgagctgctgttgtcggtttccggggtggctaagccgtcc
cagctggagttctcgggaaaggtcttaggagagagcgctatgaagtcagaaagtgacatc
ggcagccagattgactatgaattccgggtgataaacttgggaaagccactgaagtcgttc
ggcacggcgtctctgaacatcgattggcctatgaacacagctacacataaatggctgctt
tacctaatgaagatcactaccacgggtacggataatatcccctgcacaccaaacaaggtc
aacccgcttagtttaagtcagtccaggaccaaacgtgagattaaagatcaagatgacggc
acaggagacaaaggggttttatcatctcttttttctgataagaggacatcaaaagttttg
acgtgtggtgacggtgcatcgtgcgtgaagcttcaatgtagtctccagggattggacagc
aacgccgtcatcgcgctgagagctcgcctgtggaatggcacctttatagaggattacgct
gaactaagttatgtcgacattattgtgaaagcatccctcagtctgacctcttcctccaag
aacgtaaaactgacaaatacagatacacaggtacgagtgactgtattcccagtacgtaag
gcagcgcaatacggaggtctaccctggtggatcatactggtggctatattactgggcctg
ctcttgctgggcttattggtcttcctgctctggaagtgcggatttttcaaacgttccaaa
tatgacgacagcgtgccgcgttacatcgccgtgaggattaagaaggacgagcgcacacat
ccgcctgggaaagagcagccagcttccatggaaaagaaacagtggatgacgtcttggaac
gagaacgagagctactcctag
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integrated database retrieval system
