Clarias gariepinus (North African catfish): 128506273
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Entry
128506273 CDS
T10780
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like
KO
K05477
tumor necrosis factor ligand superfamily member 14
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04060
Cytokine-cytokine receptor interaction
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128506273
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128506273
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128506273
04090 CD molecules [BR:
cgar04090
]
128506273
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Tumor necrosis fators
128506273
CD molecules [BR:
cgar04090
]
Proteins
128506273
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Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Ion_trans_2
CdsD_PD1
Motif
Other DBs
NCBI-GeneID:
128506273
NCBI-ProteinID:
XP_053332616
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All DBs
Position
18:2691287..2697897
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AA seq
235 aa
AA seq
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MGEVFVVDSQATADIVPPKHWIKGTCVVYVLLGLALFGVMVEGVLIYQLYQRIPKQTSPE
MSQMSKLTGGNKTQDDGYSTETSAPQQVLKTESKPAAFLHHQNHSVSSDMTVLQWDARGF
PAFQHSFNYSNGSLIIHKEGFYYLFSKVTFRSSCHMFRHEVKLNSSRYNHHPISLMIDNR
YGVEQRPHADKKNQFSSYLGGVMHLFKTDMVFVSISDHSCLIEETQETFFGGFMI
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggtgtttgtggtggacagtcaggcgaccgcggatattgtgccccctaaacac
tggattaagggcacttgtgttgtgtacgtgctgctgggcctggcgctgttcggtgtgatg
gtggaaggggtcctcatttaccagctgtaccagcgcattcccaaacagacgtctccagag
atgagtcagatgtccaagctgactggaggaaacaaaacccaggatgatggctattctaca
gaaacctcagcaccccagcaggtcctgaagactgagagcaagccagctgcattcctgcat
catcaaaatcattctgtgagttccgatatgacggtgttgcagtgggacgccagaggcttc
cctgcatttcagcacagctttaattacagcaatggcagcctgatcatccataaggaaggc
ttctactacctgttctccaaggtgaccttcagaagcagctgccacatgttcagacatgag
gtcaagctgaactcctcacgttacaaccaccatcccatcagcctcatgattgacaacagg
tacggcgtagaacagaggcctcacgctgataagaagaaccagtttagcagctacctgggt
ggcgtgatgcatctgttcaagacggacatggtgtttgtttcaatcagcgatcacagctgc
ttgatagaagaaacacaagaaactttcttcggtggtttcatgatctag
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