Clarias gariepinus (North African catfish): 128506343
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Entry
128506343 CDS
T10780
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128506343
Ion channels [BR:
cgar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128506343
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Ion_trans_2
PriS_C
Motif
Other DBs
NCBI-GeneID:
128506343
NCBI-ProteinID:
XP_053332741
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Position
18
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AA seq
576 aa
AA seq
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MNRCSNTDDKKTDKQLTKDDKQDGERKHKVDKKDDKEVKQNKQRKIKDYLIMDPATDLYY
YWLIIVAAPAFYNLMMLVTRSCFNELQKDYTMLWVALDYTSDVIYYIDTFIRSRTGFLEQ
GLLVKDSKRLWEHYKKTPQFKFDLISMMPTDLLMLQFGIDSPELRFNRLFKMARLFEFFY
RTETRTNFPNIYRIGNLVLYILIIIHWNACIFFAISKTLGFGSDAWVYPNISDPKYGRLF
RKYTYCLYWSTITLTTIGETPPPVRDIEYLFVIIDFLIGVLIFATIVSNVGAMIANMNAS
RALFQEQIDSIKQYMQFRKVNKDLEARVVKWFDYIWTEDKTCNEKEVLKYLPDKLKAEIA
ISVHLETLGKVRIFQDCEAGLLIELVLKLRPQVFSPGDYICKKGDIGREMYIIKEGNLAV
VADDGITQFVVLSDGAYFGEISILGIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEALT
EYPEAKSILEEKGRAILLKDGLIDETLANQTEAIDLEDKVAKMETNVETIQTKLTHISAE
WAARQGRVKQKLINMEARVKAFWLNEQLNAIENLKS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatgcagcaacacagatgataaaaagactgacaagcagctcacgaaagatgac
aaacaagatggagaaaggaaacacaaggttgacaagaaagatgacaaagaagtaaaacaa
aataaacagagaaaaataaaagattatttgatcatggaccccgctacagacctatattat
tactggcttatcattgtggcagcgcctgcattctacaatctgatgatgcttgtgaccaga
tcctgtttcaatgagctccaaaaagattacaccatgctatgggtagcactggactatact
tcagatgttatctactacattgacacttttataagatccagaacaggttttctggagcaa
ggcttgctcgttaaagattccaagaggctgtgggaacactacaaaaaaacacctcaattt
aaattcgacctgataagcatgatgccaacagacttattaatgttgcagtttggcattgac
agcccagagctgagattcaatcgcctttttaaaatggctcgtctttttgagtttttttac
cgaactgagacaaggaccaactttcctaatatatatcgaatcggcaaccttgtgctctat
attttaataatcatacattggaatgcatgcattttttttgctatctccaaaacacttggc
tttggaagtgatgcctgggtttatcctaacattagcgatcctaagtatggccgcctgttt
aggaagtatacctactgtctgtactggtccacaatcaccctgaccactattggagaaact
ccaccacctgttagggatattgagtatttgtttgtaattatagattttctcattggtgtg
ctaattttcgccactattgtttctaatgttggtgcaatgatcgccaacatgaatgcttcg
cgtgctctatttcaagaacagattgactccataaagcagtacatgcagttccgtaaggtc
aataaagatttagaggcccgtgttgtcaagtggtttgactacatttggacagaggacaag
acctgcaatgaaaaggaagttcttaaataccttccagataagctaaaggcagagattgcc
atcagtgtgcatttggaaacactggggaaggtgcgtatatttcaggattgtgaggcagga
ctgctcatcgagctagtgctcaagcttcggccgcaggtcttcagccctggagactatatc
tgcaagaagggtgacatcggtcgtgaaatgtatattatcaaagaaggtaacctggctgtg
gtagcagatgatggcataacacaatttgtagtactgagtgatggtgcctattttggtgag
attagtatcttgggcatcaaaggcagtaaagctgggaatcgacggactgccaacatacgt
agtgtaggttactctgacctctttgccctctcaaaagacgacctcatggaggccctgact
gaatatccagaggccaagagcattctggaagaaaaaggtagggccatattgttgaaggat
ggtttgattgatgagacactggcaaaccagacagaagccatagacttggaagacaaagtg
gccaaaatggaaactaatgtagagacaatacaaaccaaattaacacacatatcagcagag
tgggcagccaggcagggtagagtcaagcaaaagcttatcaatatggaggccagagttaaa
gcattctggttaaatgaacaactcaatgcaattgagaatttaaaaagctaa
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