Clarias gariepinus (North African catfish): 128506412
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Entry
128506412 CDS
T10780
Symbol
pus10
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128506412 (pus10)
Enzymes [BR:
cgar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
128506412 (pus10)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
128506412 (pus10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Shisa_N
Motif
Other DBs
NCBI-GeneID:
128506412
NCBI-ProteinID:
XP_053332804
LinkDB
All DBs
Position
18:complement(9478606..9491538)
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AA seq
527 aa
AA seq
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MTLPLKDKDRPVIRKLLAAGCCGRCVLRFCCVGKYSSYQQSPEDIHKAFLAFLSEDDAEK
SHGASGEAGETGGPPCKKMKTESPEESSGEKACAEDVSEPKACSGVCVACVGVLQHFCDQ
SYAKQVSEVVKKGGYQFDNLMLAVSLPAQLSVREHSCWLHVKKELREKNMCADKEDVVQV
KDAFKWAVQGLVGKELGASVLTNSAFEVSVGFAHPETDGDCHFLATECPDCFKPTKNKAS
VFTRMAVVKALEKISDTKFLRHYPCPPVSPSSQCTPLETTCLHTSVFIAGRYNKFSRELP
QTPWVIDGERRMEGSVEELIANPLLSAFKADGFNFCSSGREDVDVRTLGNGRPFAIELLN
PHRARFNKAEIRQLQETINTSSDKIRVRDLQIVTREATSRMKEGEEEKTKSYSALIWTQK
PITPGDLDFFTNIKELKIDQKTPLRVLHRRPLAIRQRVIHSMSATYLDTQHFTLQLRTQA
GTYIKEFVHGDFGRTKPNLGALMETEVDILELDVESVDVDWPPAVPE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgactttgccgcttaaagataaagaccgcccggtcatcaggaagctgttggctgccggc
tgctgtggaagatgcgtcctcagattttgttgtgtaggaaagtattcttcgtatcagcag
tcccctgaggacatacataaagcgtttttagcgttcctcagtgaagatgatgccgagaaa
tcccatggtgcctcaggagaggcgggagagacagggggcccgccgtgtaagaaaatgaag
acggaatcacccgaggaatcgtcaggggagaaagcatgtgcagaggatgtgtcagagccg
aaggcgtgttcaggggtgtgtgtggcgtgtgttggcgtgctgcagcacttctgcgaccag
agttatgccaaacaggtgtctgaggttgtgaaaaaaggcggctaccagtttgacaatctg
atgctggccgtctctcttcctgctcagctgtccgtcagagagcattcctgttggttgcac
gtcaagaaggaactcagagagaagaacatgtgtgcggataaggaggacgtggtccaggtg
aaggacgcttttaaatgggccgtccaggggctggtgggtaaagagctgggagcgtcggta
ctcactaacagcgcattcgaggtcagcgtcggtttcgcgcatccagaaacagacggagat
tgccacttcctagcaacggaatgtccagattgcttcaagccgacgaagaacaaagcttcc
gtgttcactaggatggcggtggtgaaagcgctggagaagatctcagatacaaagttcctc
agacattacccatgtccacctgtctcaccctccagccagtgcacgccacttgagaccaca
tgtctgcatacatctgtcttcatagcagggaggtataataagttctcccgggagcttcct
cagaccccctgggtgatagatggagagagacgcatggagggatcagtggaggagttgatc
gccaatcctctgctgtctgcctttaaagcagacggttttaacttctgctcatccgggaga
gaagacgtggacgtacggacgttaggaaatggacgcccgtttgccatcgagcttctgaat
ccacacagagcaaggtttaacaaagccgaaatcagacaactccaggagacgatcaacacg
tcatctgacaaaatccgagtccgagacctgcagatcgtaacccgagaagctacaagtcgt
atgaaagaaggagaagaggaaaagaccaagtcctacagcgcccttatctggacccaaaag
ccgataactccaggcgatctggacttctttacaaacatcaaggagctgaagatcgatcag
aagacccccctccgcgtcctccatcgcagaccacttgccatcagacagagagtcatccac
tccatgagcgcgacctacttggacacacaacacttcacactgcagctgcgcacgcaggcc
gggacctacattaaagagtttgtgcatggagacttcggccggacgaagcccaacctcggt
gccctcatggagacagaggtggacattctagaattggacgtggagtcggtggacgtggac
tggcctcctgctgtacccgagtga
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