Clarias gariepinus (North African catfish): 128506499
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Entry
128506499 CDS
T10780
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04148
Efferocytosis
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128506499 (vps8)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128506499
NCBI-ProteinID:
XP_053332967
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Position
18:13844868..13954027
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AA seq
1420 aa
AA seq
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MSESPDTRSLVSASSQLNLMEIDAIDDKEFDIPQVDTPPTLESILNEPEEEDEPFVLEDT
CLLNTENMDAHSCETASLASSDSGDRAHLKRRRKAVETNVTIHGSVLRHSVLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFDQNQALRLCLGTTATGAEYGAVSALSIN
HDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDLPTLAVCNDSGGSV
FELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAAPELKDHPITHYCLLAMASLTKILV
IGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAAQKAVNPILAFCRGDTVHFLLVKKDESG
TVHVIKQRQLQLNCDLISLTWLNPRTLVLLDSGEKLHVVDRPSQEELETLDMAEVQLVYN
SSHFKSLATGGNVSQALALVGEKACYQSVCSHGGQIIYLGTKSVHVLNLRNWRERVDHLL
KQEKFTEALSLAWSFHEGTAKAVLGLFGDPAKWKGVVADKMVEILFQYVERSLKKCPEQG
KIQLLEQHFQDMIPVMVDYCLLLQRTDLLFNQIYSRLVENSVAKGVFLESLEPYILSERI
GCLTAPVMRDLLSYFQENGMMESVEGCLVHMDITNLDIQQVVQMCWDNQLYDAMVYVFNS
GMNDYISPMEKLFQVIGPPLREGRSLTEEQVVMGNKLLVYISCCLAGRAYPLGDIPEDLV
PQVKNQVFEFLIRLHSLEAIQEEEVYPYIRTLLHFDTREFLNVLALTFEDFKNDKQALEY
QQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSPDD
DSRHTERQQVLLELLQVGGMVQFDEGQLLALAEKAEFYQICEFLYEQKHLYDRIIACYLK
DPLRKEEVYNYIHNILSMPGYSPEEKQTTWNKSLEHIKELVSINPAKAAELVAVHFISEV
EPIITALQDDHLVYKFLENLLNPSDGQKPEAVMNLGPELHELLVDLMCRFSPRQVTPYLE
TSQSYRLEETIRITKQHKLHEATAYLLEKKGDVQGAFQVLLQTLKGKLNTLVQESSEPPT
QRPEEEEEEEVTGEGATPLARVDEALSDIIRLCHRSSHGLNLQQREGLWFPLLEVMMSPQ
KFLKGPNAKDTSDALKELTMKVLNSMSSFIALPAIIQRILQDPVYGKGKLAEIQGLILGM
LETFNYEQTLLETTTNLLNSDLHWSLAHLRKAVSRGLHPRQDHCNICLQQYKRRQESEEE
IIIFSCGHLYHCQCLQRKEQVVAGKDPGFAGDRVHSWSCYKCTSSQGARPGDRPLAEGGR
ARSTSLAQTKVTSVHRGPTAETHHRKELSEVTLDAQQTQAWDQLRCMYRGPSRLAILTEL
THSHSSEKSGLLNPAHPGPGSIYHSDNLSLKLSPPPMVEE
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtctccggatactcgcagtctggtgtccgcgtcctcacagctcaatctaatg
gaaatagatgctattgacgacaaagaatttgacatccctcaagttgacactccaccgact
ttagagagcatcctgaacgagcctgaggaagaggatgagcccttcgttctggaggacact
tgccttttgaacactgagaacatggatgcgcattcctgcgagacggcctcccttgccagt
tcagacagcggagaccgtgcacatctcaagaggagaaggaaggcagtcgagacgaatgtg
accatccacggctcggttctgagacacagcgtcctgaaaggcatctcggctcagatcgtc
tccgccgccgacaaagttgatgcaggcttgccaacagcaattactgtctccagtgttatc
gccgtgggaacgtcgcatggcctcgctctggtgtttgatcagaaccaggcgctgaggctc
tgtctgggtaccacggcgacaggggcagagtacggtgcagtgtcagccctgagcattaac
catgactgcacgcgtctgctttgtggctttgctaaaggacagatcactatgtgggatttg
gctaacgggaagctgctgcgcaccatcactgacgcccacccacccggcacggccattctg
cacgtcaagttcacagatctgccaacgcttgctgtatgtaacgacagtggaggatcagtg
tttgagctctcattcaggagggtgatggggatgaggacgtgcgagtctcggtgtttgttc
agcggcagtaagggggaggtgtgctgcgttgagccgctgcatgcagcccctgagcttaaa
gaccatcccatcactcactactgcctgctggccatggcctcgctcaccaagattctagtg
attggactgaagccgtctctaaaggtctggatgacttttccatatggcaagaccgaccct
gccagcgtgccccagttggcgtggcagtttgtagctgctcagaaagcagtgaaccccatc
ctcgccttctgcagaggagacactgtccacttcctgctggtgaaaaaggatgaatctggt
acggtccatgtcatcaaacagcgacagctccaactcaactgtgaccttatcagtctgaca
tggctgaatcctcgcacgctggttttgttggacagcggagagaaactgcacgtggtggat
cggcccagtcaggaggagctggaaactctggacatggccgaggtgcagctcgtctacaac
agcagccatttcaaatcgcttgctacaggaggcaacgtcagccaagccctggctttggtg
ggagagaaggcgtgctatcagtctgtgtgcagtcacggtggccagatcatctacctggga
acaaaatctgtccatgttctgaacctcaggaactggagagagcgtgtcgatcatttattg
aaacaggagaagttcaccgaggcgctctctttagcctggtcttttcatgaaggcacagcc
aaagcagtattgggtctgttcggtgaccccgccaagtggaagggcgtggtagctgacaag
atggtggagatcttgttccagtatgtagagcgttcgctaaagaagtgtcctgaacagggc
aagatccagcttctggaacaacactttcaggacatgattcctgtcatggtggattactgt
ctgctcctgcagaggactgacctgctgtttaaccagatctactcgaggctggtggagaac
tcggtggctaagggcgtcttcttggagagtctcgagccgtacatcctgagcgagcggatt
ggctgcctgacagcgccagtcatgagggaccttctcagttacttccaggaaaatggcatg
atggagagcgtggagggctgcctggtgcacatggacatcaccaacctggatatacagcag
gtggtgcagatgtgttgggataaccagctctacgatgccatggtgtacgtgttcaacagt
ggcatgaatgattacatcagccccatggagaaactctttcaggtgattggtcctcctctg
cgtgaaggcagatctctcacagaagaacaagtggtcatgggaaataagctgcttgtgtac
attagttgttgtctagcaggacgagcctatcctttgggggacatcccagaagaccttgtg
ccacaagttaaaaatcaggtgtttgagttcctgatccgcctgcattcgttagaggccatc
caggaggaggaggtgtatccgtacatccggaccctgctgcatttcgacacccgcgagttc
ctcaatgttctggcgctgacgtttgaggattttaagaacgacaaacaggctctggagtac
cagcaaaggattgtggacattttacttaaggtcatggtggataactcggacttcactccg
tcccaggtgggctgcctgttcacctttctcgctcgtcagctagccaagcctgacaacacc
ctttttgtcaacaggaagttgtttgatcaggttctggagtttctgtgcagtccagacgat
gactccagacacacagagaggcagcaggtgttgttggagttactgcaggtgggcggcatg
gtccagtttgatgagggacagcttctcgccctggcagaaaaagcagaattttatcagatc
tgtgagtttttgtatgagcagaagcacctgtacgatcgaatcatcgcctgctacttgaag
gaccccttaagaaaagaggaggtttataactacatccataacatcctgtccatgcctggc
tacagtccagaggagaagcagaccacatggaacaaatccttggagcacattaaggagctg
gttagcattaaccctgctaaagccgccgagctggtagcggtccactttatcagcgaggta
gagcctattatcacagcactacaggatgatcatttggtgtacaagttcctggagaatttg
ttgaatccaagtgatggacagaagcccgaggctgttatgaatctggggcctgagctgcac
gagctcctggtggacttgatgtgccgttttagtcctcgccaagtcaccccttacctggag
acatcccagagctaccgcctggaggagaccattcgaatcaccaaacagcacaagctgcat
gaagccaccgcctacctgctggagaaaaaaggagacgtgcagggagccttccaagttctg
ctacagactctaaaggggaaactgaacacactcgtccaggagagttcagagccgcccaca
cagaggcctgaggaagaagaggaggaggaggtgactggtgaaggtgccaccccattggcc
agagtggatgaagcccttagtgacatcatcagactgtgtcaccggagctcacatggactt
aacctgcagcagagagagggtctctggtttcctctcctagaggtgatgatgtcgccacag
aaattcctcaagggcccaaatgccaaggacacatctgatgcacttaaggagctgactatg
aaggtgttaaacagcatgtctagcttcatcgctctgcctgccatcatccagcgcatcttg
caggaccccgtgtatgggaagggaaagttagcagagatccagggcctcattctgggcatg
ctggaaaccttcaactatgaacagactctgttggagaccacgactaatctcctgaactcg
gacctgcactggtctctggctcacctgcggaaggccgtcagcagggggctccacccccga
caggaccactgcaacatctgcctccagcagtacaagaggaggcaagagagtgaggaggag
atcatcatctttagctgtggtcacctgtatcattgtcagtgcctgcagcggaaggaacaa
gtggtagctggtaaagatccgggtttcgcaggagatcgagttcactcgtggagctgttat
aagtgcacgtccagtcagggagctcgtcccggagaccgcccgctcgccgagggaggccga
gcccgatccacttctctggcccagaccaaagtgacgtccgtccatcggggacccaccgcc
gagacacatcaccgaaaggagctgtctgaagtgacgctggacgcccagcagacgcaggcg
tgggaccagctgcgctgcatgtacagaggaccctctagattggccatccttacagaactc
acccactcccacagcagcgagaaaagcggcctgctgaaccccgcccacccaggaccggga
agcatctaccacagcgacaacctcagcctcaagctttctccaccgccaatggtggaggag
taa
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