Clarias gariepinus (North African catfish): 128506571
Help
Entry
128506571 CDS
T10780
Name
(RefSeq) transformer-2 protein homolog beta-like isoform X1
KO
K12897
transformer-2 protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128506571
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgar01009
]
128506571
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128506571
Protein phosphatases and associated proteins [BR:
cgar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128506571
Spliceosome [BR:
cgar03041
]
Common components
Common spliceosomal components
SR proteins
128506571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
DUF4778
Motif
Other DBs
NCBI-GeneID:
128506571
NCBI-ProteinID:
XP_053333065
LinkDB
All DBs
Position
18:13763403..13769250
Genome browser
AA seq
325 aa
AA seq
DB search
MVGSGSVSVVLILFGFMQEESRSRSVSPRGSVKSNSNSPGRSKDGSHRSRSRSKSRSRSR
SKSRSRSRSHRSSRRHHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRVQSSL
SSAFARDTDHTTRPQLSHSGSIKANPEPNCCLGVFGLSLYTTERDLREVFSKYGPLASVT
IVYDQQSRRSRGFAFVYFENREDSKEAKEQANGMELDGRRIRVDFSITKRPHTPTPGIYM
GRPTYGGGGGGGGGGGGGERRPSTSSSRSRDYYDRGYDRGYDRGYDRYDDREYYKSYRRR
SPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggtaggttctggctctgtttctgttgtgctcattttgtttgggttcatgcaggaggag
tcccgctctcggagtgtgagtcccagaggctctgtgaagtcgaacagcaactctccagga
agatctaaggatggctcccaccgctctcgctccaggtccaagtcccggtccaggtccagg
tcaaagtcgaggtctaggtctcgttctcatcggagctctcgtcgccatcactcccgttcc
cgttctcgaaggcgccactcacgcagtcggtcatacagccgcgagtaccgtcgcagccgc
agccactcgcctatgtccaatcgcaggcggcacgtcggcaaccgggtacaaagctcattg
agctctgcgtttgcacgagacacagatcataccacacgtcctcagctctctcactctggc
tccataaaagcaaaccctgaacccaactgttgcctgggtgtgttcggcctgagcctgtac
accaccgagcgagacctgagagaagtgttctctaaatacggccctcttgccagcgtcacc
atagtctacgaccagcagtctcgccgctcacgtggctttgcctttgtctactttgagaac
agggaggattccaaagaggctaaggagcaggctaatggcatggagttggatggtcggcgt
ataagagtggacttttccattacaaagagaccacacacccctacacctggcatttacatg
ggccggcccacctatggtggtggtggaggaggaggtggtggaggaggaggaggtgaaaga
agacccagtacatcctccagccgttccagagactattatgatcgcggctatgaccgtggc
tatgatcgagggtatgaccgctacgatgaccgggaatactacaaatcctacaggcgcagg
tctccttcaccctactacagtcgtggaggatacagatcccggtcccgctcacgatcctac
tctccacggcgctactga
DBGET
integrated database retrieval system
