Clarias gariepinus (North African catfish): 128506596
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Entry
128506596 CDS
T10780
Symbol
otx2a
Name
(RefSeq) homeobox protein OTX1 A
KO
K09326
homeobox protein OTX1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128506596 (otx2a)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
128506596 (otx2a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
128506596
NCBI-ProteinID:
XP_053333097
LinkDB
All DBs
Position
18:complement(9362170..9368369)
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AA seq
354 aa
AA seq
DB search
MMSYLKQAPYAVNGLGLGGAPMELLHPSVGYPANPRKQRRERTTFTRTQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSSSSNSGSSTKIRPAKKKASP
SRESPGSESSGQFSPPAVSSTSSSSSSSSSSSSNSNLGGLGMSSTTASGATPVSSIWSPA
PISPLPAPHTVPDPTPPTSASCMQRGVTGTGGPAGVTSYPVSYNQTSGYAQSYPSTASSS
YFGSMDCSSYLAPMHSHHPHHPQLSSMTGTGVTGHHTHPHHPHHLGQSSGHHHPHHHPHA
HTHQGYGGAALPFTSTDCVDYKDYKDQTASPWKLNFSADCLDYKDQAAWRFQVL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcatacctcaaacaggccccgtatgccgtgaacggcctggggctcgggggcgcg
cccatggaactcctgcacccttctgttgggtatccggctaatccccgcaagcagcggcgg
gaaaggaccacgtttacgcgcacgcagctcgacatcctggagtctctgttcgccaagacg
cgttaccccgacatcttcatgagggaagaagtggctctgaagatcaacctgcctgagtct
agagttcaggtgtggtttaagaaccggcgagctaagtgtaggcagcaacagcagagcagc
agcagcagtaacagtggcagcagcactaaaatccgtcctgcaaagaaaaaagcctctccc
tcacgcgagagtcctggttctgagagcagcggtcagttcagtcctccagcagtgtcgagt
accagctcatcgtcatcatcttcatcctcatcctcttcaaattcgaacctgggcggactg
ggtatgagcagtaccactgcctctggagccacacccgtgtcatctatctggagccccgcc
cctatatcaccccttccagctcctcataccgtcccagatcccacacctcccaccagtgca
tcctgtatgcagcgtggagttacgggcacaggagggccagccggagtaacttcctacccc
gtgtcctacaatcagacgtccggatatgcccagagttaccccagcactgcatctagctca
tattttggaagcatggactgtagctcctacctggcacccatgcacagccatcatccacac
caccctcagctcagctccatgacgggaaccggggtgactggacaccacacacacccacat
cacccccatcacctcgggcagagcagcgggcaccaccaccctcaccaccacccgcatgca
cacacacaccagggctacgggggtgcagcactgcccttcacttccacagactgtgtggat
tacaaagactacaaagaccaaactgcctcaccatggaaactaaactttagtgcagactgt
ttggactacaaagaccaggcagcttggcgttttcaggtcttgtga
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