Clarias gariepinus (North African catfish): 128506605
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Entry
128506605 CDS
T10780
Symbol
cul4a
Name
(RefSeq) cullin-4A
KO
K10609
cullin 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03420
Nucleotide excision repair
cgar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128506605 (cul4a)
09124 Replication and repair
03420 Nucleotide excision repair
128506605 (cul4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128506605 (cul4a)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128506605 (cul4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506605 (cul4a)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
128506605 (cul4a)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
128506605 (cul4a)
TCR (transcription coupled repair) factors
Cul4-CSA complex
128506605 (cul4a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128506605 (cul4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HTH_20
Motif
Other DBs
NCBI-GeneID:
128506605
NCBI-ProteinID:
XP_053333108
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All DBs
Position
18:20265148..20291942
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AA seq
752 aa
AA seq
DB search
MMAEENRSVSFSALMENSNGVTKTTPSSKSGTSKKLVIKNFKDRPKLTETYTEDTWLKLR
DAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQILQFREDSLD
SLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVSDSG
VQSRTVEGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFENRFLVETDRLYAAEG
QRLMLDRDVPEYLHHVARRLDEENDRVISYLDQSTQKPLISAVEKQLLGEHMTAILQKGL
STLLDENRVTELTLLYQLFSKVKGGLPVLLQFWREYIKSFGGEIVGSPEKDKDMVQELLD
FKDKMDNVAHGCFQRNESFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEATEE
ELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAF
TSKLEGMFKDMELSKDIMIQFKQYMQNQSDPSNIDLTVNILTMGYWPTYTPMDVHLPSEM
VKLQEVFKTFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEGEE
FTLEEIQTATGIEESELRRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNNDFRHKLFRI
KINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKFPV
KPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaggagaacaggagtgtgagtttctcagctctgatggagaacagtaacgga
gtgaccaaaacaacaccgagctcaaaatcaggcacctccaagaaactggtgattaaaaac
tttaaagacagacccaagctgacggaaacctacaccgaggacacgtggctgaagttacgc
gatgccgttggagcaatccagaacagcacgtcaatcaaatacaacttggaggaactttac
caggcagtggaaaatctctgctcctacaaagtctcaccgatgttatacaaacaacttcgg
caagtgtgtgaagatcacgtgcgggcgcagatcctccagtttagagaagactctttggac
agtctttcttttctgaagaggatgaacagatgctggcaagaccactgcagacaaacaatc
atgatccgtagtatttttctctttctggatcgcacatatgtcctccagaactcccttctt
ccctccatatgggacacggggctggagctgtttcgtacacacatcgtgagcgacagcggc
gtccagagccgtacagtagaaggaatcttggagcaaattgaacgagagagaaacggcgag
actgtggatcggagtctcttgcgcagcttactaggcatgctctcagacctacaggtgtat
aaggagtcttttgaaaaccggtttctagttgagacggatcgcttgtatgcagctgagggt
cagagactgatgttagacagagatgtacccgaatacctgcaccatgtagcacgacgtcta
gacgaggagaacgatcgtgtcatcagttacctagatcagagcactcaaaagccgctgatc
tctgcagtagaaaagcagctcctaggtgaacatatgaccgccattttacagaaaggtctc
agcacactgttggatgagaaccgtgtaactgaactgactctgctttaccagctcttcagc
aaagtgaaaggaggcctgcctgtattacttcagttctggagagagtacataaagagcttt
ggcggcgagatcgtcggatctcccgaaaaagataaggacatggtgcaggagctgctggac
tttaaagataaaatggacaacgtggcacacggctgcttccagaggaacgagagctttatc
aacgccatgaaggaggccttcgagagcttcattaacaagagacccaacaaaccagcagag
cttatcgccaaatatgtagactccaaactacgtgctgggaacaaagaggccacagaagaa
gagctggagagaatcctcgacaagatcatgattatctttcgcttcatccacggtaaagat
gtgtttgaagcgttctacaaaaaagacctcgcaaagcgcctgctagtgggcaaaagtgcc
tccgtggacgctgagaagtccatgctgtccaaactcaaacatgagtgcggcgcggcgttc
accagcaagctcgagggcatgtttaaagatatggaactctccaaagacattatgatccag
ttcaaacagtacatgcagaaccagagtgatcccagcaacatcgatctgaccgtcaacatt
ctcaccatgggctactggcccacctacacccccatggacgtccatctgccctctgagatg
gtaaagcttcaggaggtgtttaaaaccttctacctcgggaagcacagtgggagaaagctt
cagtggcagcccacactgggccacgcagtgcttaaagctgagtttaaggagggtaaaaag
gagctgcaggtttctttattccagacacttgttctgctcatgtttaatgaaggagaggag
tttacactagaagagatccaaacagctacaggaatagaggagagcgagctgagacgcacg
ctgcagtccctggcatgtgggaaagcccgcgtacttaataaaaaccccagaggcaaagac
gtggaggacggagaccgcttcaacttcaataacgacttcagacataaactcttccgcatt
aaaatcaaccagattcagatgaaggagacggtggaggaacaggtgagcaccacagagcgt
gtcttccaggacaggcagtaccaaatagatgccgcggtagtgaggatcatgaagatgagg
aagaccctcagtcacaacctgctggtgtcagaactctacaaccagctcaagtttcctgta
aagccaggtgacctgaagaagcgcatagagtccctcattgaccgagactacatggagaga
gacaaggagagccccaaccagtatcattacgtggcctga
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