Clarias gariepinus (North African catfish): 128506705
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Entry
128506705 CDS
T10780
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128506705 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
cgar04515
]
Cadherins
Protocadherins
128506705 (si:ch211-199f5.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128506705
NCBI-ProteinID:
XP_053333244
LinkDB
All DBs
Position
18:complement(19143752..19147726)
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AA seq
992 aa
AA seq
DB search
MGGNAGGHRWMFFFTLLSLPLLPARAAGRTMKYETYEEDAPGTVIGNLAKDMSLSPSVGS
KTNFRMMKQVNASFVRLRESDGQLTVGEKIDRERICKHSPQCVIAFDVVSFSKEQFKLIH
VEVEVKDINDNAPEFPRKESTLEISENTAPGTRIPLDVAVDEDVGTNYIQSYQISVNSHF
TIDVLSRADGVKYAELVLMKELDRETQASYALELVATDGGNPPRSGVTKINVKVKDYNDN
SPIFERSHFSVEIPEDAPVGFLLLDLNAVDPDEGLNGEVVYGLGNQVPSEIRQLFRVDRK
TGRITLESPVDYESKTTYEFDVQASDLGPSPSPPAICKIVVQVQDVNDNAPEITITPMTS
MAAGVAHVTEAAAKDTFVALISTSDRDSGVNGQVHCTLYGHDHFRLQQAYEDSYMIVTTA
PLDREKIPEYNLTVVAEDLGSPPFRTITQYTVRLTDENDNAPIFSKAAYEVSLVENNAPG
AYITTVVARDSDTGQNSKVSYKLAETYVMGSPVSTFVSLDPATGSLYALRSFNYEVLKHL
ELRVHASDGGAPQLHGTATINLKIVDQNDNAPVIVHPALSNGSVDVLLPKDAPSGYVITQ
IKARDADEGINAELSFQMTSSEAGALSINKVSGEIYVTHEGAYDVGETFKATVTVSDHGR
PSLTSTAVIRFKVIAGAPKGDRNLYRNAGSADEGHDWDLSVVIIVVLAGSCTLLLLAIIL
IATTCNKRKLDKRHDGFEDEKEEDVNLHVEKNNSDPLIPVHNENVFDAQPYTNKPAFTGS
VQVSNDECCSSEDGIEPAYETEDKSSGAKLDGYLTLPGYGKEAVRPITIWKGNSYTTISA
RDPQFSGKDSGKGDSDFNDSDSDISGDGLKKDGHQHNAQDALWACTSECRILGHSDRCWS
PNAARMNSNSRQHLSTFAKAGSLPRDTLRRENYYQAHIPKTVGLQSVYERVLHQEYVIVP
PPQPSRVQDINDVTIPVYSPTTARCSTSTNEV
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaatgcaggcggtcaccgatggatgttctttttcaccttgctgtcattgcct
ctgttgccagcgcgagcagcgggaagaaccatgaaatatgaaacgtacgaagaggatgcg
ccgggcaccgttattggaaacctggccaaggacatgtccttaagtccgtccgtgggctcc
aagacaaatttcaggatgatgaagcaggtcaacgcatcttttgttcggctcagagaaagc
gacgggcagctgactgtaggtgagaagattgacagggagagaatttgcaagcactctcct
cagtgtgttattgccttcgatgttgtgagtttctctaaagaacagttcaaattgattcac
gtcgaagtggaggtgaaggacattaatgacaacgcgcccgagtttcccagaaaggagtct
acgctggaaatttcagaaaacacagcacccggtaccagaatacccctggatgtggctgtg
gatgaagacgtgggtaccaactacattcaaagctaccagatctcagtcaatagccacttt
acaattgacgtgctgagcagagcggatggggttaaatatgcggagctggtactaatgaaa
gagctggacagggagacacaggcgtcgtacgcgctggagctcgtggcgacggacggcgga
aatccgccccggtccggcgtcaccaagatcaacgtcaaggtgaaggactacaatgacaac
agtcccattttcgagcgcagccacttttcagtagaaataccagaggacgctccagtgggc
tttctgcttttggatctcaatgcagtggatcctgatgaaggtttgaacggcgaagtggtg
tacggactcggtaaccaagtgccctcggagatcaggcaacttttccgcgtagatcggaaa
accgggcgcatcacactcgagagcccggtggattacgagagcaagacaacgtacgagttc
gatgtccaggcgtccgatctgggtccgagtccgagtccgccggccatctgtaaaatagtc
gtgcaggtgcaggacgtgaatgacaacgcacctgagatcaccatcacgccgatgacgtcc
atggcggcgggagttgcgcacgtgaccgaggcagccgccaaggacaccttcgtggctctt
atcagtacttcggaccgggactcaggagtcaacggtcaggtccactgcaccctctatgga
cacgatcacttccgactccagcaggcgtacgaggacagctacatgatcgtcaccacagct
cctctggacagggaaaaaatacccgagtataatctgacagtggtggctgaagatcttggg
tctccaccgtttcgcacgatcacccagtacaccgttagactgactgatgaaaacgacaac
gcgcccatattcagcaaagccgcctatgaagtgtcgctcgtggaaaacaacgcaccgggc
gcgtacatcaccacggtggtggcgcgcgactcggacacgggacaaaacagcaaagtgagt
tataaactcgcggaaacctacgtgatgggctcgcctgtgtccacatttgtctctctggac
cccgccaccggctctctttacgcgctgagaagtttcaattacgaagttctcaagcatctc
gagctgcgcgttcatgcgagtgacggcggcgcgcctcagctgcacggcaccgccaccatc
aacctgaaaatagtcgatcagaacgacaacgctcccgttatcgtccatccggcgctcagt
aacggctctgtggacgtcctcttgcctaaagacgccccgtcggggtacgttatcacgcag
atcaaggcgagagacgccgacgagggcattaacgcagagctctccttccagatgacctcg
tccgaagcaggcgcgctttctatcaacaaagtcagcggggagatctacgtgacccacgaa
ggtgcctacgacgtgggcgagacgtttaaagccacggtgacagtgagcgaccacggcaga
ccctctctcacttctacagccgttatccgtttcaaggtaatcgccggcgctccgaaaggt
gaccgtaacctgtacagaaacgccggcagcgccgacgaagggcacgactgggatctgtca
gtggtcatcatcgtggttctggctggaagctgcacgcttttgctcttagccatcatttta
atagcgaccacttgcaataagcgcaaactagacaagaggcatgacggattcgaagatgag
aaggaagaggacgtgaatctgcacgtagagaagaataacagcgacccgctgattccagtt
cacaatgaaaacgtgtttgatgcacagccctacacaaacaaacccgcttttaccggatcc
gttcaagtgagcaatgatgagtgctgcagctctgaagacggaatcgaacccgcgtacgag
accgaggacaaaagctccggagcgaaattagacggatatttaacactgcctggttatggc
aaagaagctgtaagaccgattacaatatggaagggcaactcatacacaacaatttcagca
cgagatcctcagtttagtgggaaggacagtggcaaaggggacagtgacttcaatgacagt
gattcagacataagtggagatggcctgaagaaggacggacaccaacacaatgcccaagat
gctctgtgggcatgcacaagcgagtgcaggattctcggccattcagaccgctgctggagt
ccaaatgccgccaggatgaacagcaattccagacagcatctgtctacatttgctaaggca
ggctcgcttccaagggacaccctcagaagagagaactattatcaagcacacatccccaaa
acagtgggtttgcagagtgtttatgaaagagtgctacaccaggagtatgtcattgttccc
ccaccccagccgagcagggtgcaagatatcaatgatgtcaccatcccagtatattctccc
acaacagcacgctgttccacttccacaaatgaagtgtaa
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