KEGG   Clarias gariepinus (North African catfish): 128506707
Entry
128506707         CDS       T10780                                 
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128506707 (u2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgar03041]
    128506707 (u2af1)
Spliceosome [BR:cgar03041]
 Complex A
  U2 snRNP components
   U2 related factors
    128506707 (u2af1)
 Complex B
    128506707 (u2af1)
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_2 RRM_occluded
Other DBs
NCBI-GeneID: 128506707
NCBI-ProteinID: XP_053333247
LinkDB
Position
18:18040023..18046550
AA seq 228 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADASRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRHE
EDAEKAVMDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKRHRSRSRSRERRSRSRDRGRRDRERRRSRDRERSGRF
NT seq 687 nt   +upstreamnt  +downstreamnt
atggcggaatacctagcgtccatttttggcacagagaaagacaaagtcaactgctcattc
tactttaagattggagcatgtcgacatggagatcgatgctccagactccacaataaacca
acttttagccagaccatcttgatccaaaacatctaccgtaaccctcagaacagcgctcag
acagctgatgcctctcgctgtgctgtgagcgatgtggaaatgcaggaacattatgacgag
tttttcgaggaagtcttcacagaaatggaagagaagtacggcgaggtggaggagatgaat
gtgtgtgataatcttggcgatcacctcgtcggcaacgtttacgtgaagttccggcatgag
gaagatgccgagaaagctgtgatggacctgaataaccgctggttcaacggccagcctatc
catgccgaactctccccggtgactgacttcagagaagcctgctgcaggcagtatgaaatg
ggggagtgcactcgaggcggcttctgtaacttcatgcatctaaagccgatctcccgtgag
ttgagaagggaactgtacggacgccgtagaaaaaggcaccgctctcgttctcggtctcgt
gaacggcgctctcgctcgcgggaccgtggtcgtcgtgaccgggagaggaggagatcaagg
gatcgcgaacgctccggaaggttttga

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