Clarias gariepinus (North African catfish): 128506723
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Entry
128506723 CDS
T10780
Name
(RefSeq) integrin alpha-M-like
KO
K05718
integrin alpha L
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
cgar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128506723
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128506723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506723
04515 Cell adhesion molecules [BR:
cgar04515
]
128506723
04090 CD molecules [BR:
cgar04090
]
128506723
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128506723
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128506723
CD molecules [BR:
cgar04090
]
Proteins
128506723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
128506723
NCBI-ProteinID:
XP_053333264
LinkDB
All DBs
Position
18:704075..804126
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AA seq
1173 aa
AA seq
DB search
MALLVLLLWGVSLSYGFNVDVLDPEKFSGNNEEFFGYRLLQYQSDKMKQIIVSAPLGTNS
SGALYSCTVEKNDCSSFYQPDSKAIRFFGMSMTVGTSPSATLTSCSPSFNHECDGNSLLN
GICYQFNNTLKMVTKITAAFQECTKSKVNLVFLFDGSSSMQTSDFNKNKEFIWNIMTTMK
NTSIEFAAVQFSSDFRTVFTFKDYVSGTAKKRLDDEVHMKQLTNTHRAIQFTLDHLFNNN
KSGADPEAKKALVIITDGAPSDLDNKVTHRCEEQNIVRFVIGVGHQVKLEKLEKFASEPK
ENNIFMINNYAGLNGLLNNLQNKIFGMEGTRGMLFSKELSQSGFSAASDKDTLILGAVGS
NHWTGNLYEVTGSEASISEMEIKDINLNNDSYNGYSVVVGQRGRDSLVFSGAPRCDYRGR
VTLFRKSTDKWEAISNIAGELIGSYFGGSVCVLDLDSDNNTDFLVVGAPLYYQPHPQREG
RVYIYRLTQQLKLEKQLEISESAQGRFGMTLAAVSDLNGDQLKDLAVGAPLEDDQKGAVY
IYLGNHDHGIRSKYSQRIVASSINKQLQHFGLSIDGVMDMGQDGLIDIAVGAQGTVLLLR
TRPVVSVSAKLSFSPSEINLNHFDCLGSSDNAIPVLYLSTCFSMAEDTKSKGGVRSGLNV
SLELKADAVRKDSRAFFNKDDKTSRSLVKSVLLNTEVSCYNHTVYMKSCVKDTVSPVLFR
LNFSQFDHQPDYSNAILNIDSKNTAHVEVPFQINCKNTTCVSDLQLNFNFLNSTLLVVDQ
ASFIIHVTLVNTGDDSFNTSVVLFYPPGLSLSLFKTIKQNRRTRSSCGDRDEGALNKTTC
SISLPVYRSNTEAVFEGVFRISRDYNWTDIMKMTLVASSDNNRNTSSTTVMKTLPVLYSV
DVAVSSVPELSVTYLNFSLGDKGPKPIHIVFKVRNLGLKGLPVTISFRMLNHTDEKIFHL
DNNSILSNITVCSIIPPQKHDDILTEQFVNFTCRPFSLDPGSVVYINLSANVTFPNKQQY
SEKWSFSGFKEEDDFSVFAQLDFDKKFYHQLSGHSENDSSRFHRAHISVKAELVVPPDMI
MIIGTGVGGGLLLLFIFIILLWKCGFFKRKRFAPCDEGSEYRTEDYDECGETMGKMDQSP
SRSEEKPFIPAEGKGVGSENGSKENGEMEKSVE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctcgtcctgctgctctggggtgtctcactttcctatgggtttaatgttgac
gttttggacccagagaaattctcaggaaataatgaggagttttttggatacagactgttg
caatatcagtctgataagatgaaacaaattatcgtcagcgctccactaggcacaaacagt
tcaggagctctttacagttgcacagtggagaagaatgactgcagctctttttatcagcca
gactcaaaggcgatcaggttctttgggatgtccatgacagtggggacgtctccatcagcc
acactcactagctgcagcccgagtttcaatcatgagtgtgatggaaactcactcctgaat
ggaatctgttaccagttcaacaacactctgaaaatggtcaccaagatcaccgccgcattc
caagagtgcacgaagagtaaagtgaacctggtttttctttttgacggctccagcagcatg
caaacatctgacttcaataagaataaagaattcatatggaacatcatgacaacaatgaaa
aacacatctattgagtttgctgctgttcagttttctagcgatttcaggacagttttcacc
tttaaagattatgttagtggcacggcgaagaagagacttgatgacgaagtgcacatgaag
cagctcacaaacacacacagagccatccagttcacccttgatcatctgtttaataataat
aagtccggtgcggatcctgaagctaaaaaagccctcgtcatcatcacagatggagctcct
tctgatttagataataaagtgacacatcgctgtgaggaacaaaacattgtccgctttgtt
attggggtggggcatcaagtcaaattagagaagctggaaaagtttgcctcagagccgaaa
gagaacaacatcttcatgattaacaactacgctggacttaatggacttttgaataattta
caaaataagatctttggcatggagggaactcggggcatgttgtttagtaaagagctgtct
cagagcggattcagtgctgcaagtgacaaggacactctcatactgggagcggttggatct
aatcattggactggaaacctgtatgaggtcacaggatctgaagcttcgatcagtgagatg
gaaatcaaagacataaacctaaataatgattcatacaatggttactctgttgtggttggg
cagaggggcagagattctcttgtgttctctggagcaccgagatgtgattacaggggtcgg
gtgactctgttcaggaagagcactgacaagtgggaagccatcagcaatatcgcaggagaa
ctgatcggctcgtatttcggaggatcggtgtgtgtgttagacctggactcagacaacaac
actgacttcctcgtggttggagctccgctgtattaccaacctcatcctcagagagaggga
cgggtgtatatctacagactcacacagcagctgaaattggagaagcagttggagattagt
gaatcagctcagggtcggtttgggatgactttagctgctgtatcagatctgaatggagac
cagctgaaggatttagctgttggagcgccactggaagatgatcaaaaaggagccgtttac
atttacctcggcaaccatgatcacggcatccgctctaagtacagccagagaattgttgca
agttccattaataagcagcttcagcatttcggcttgtcgattgatggtgtaatggacatg
ggacaggatggtctgatagacattgctgttggagcacaagggaccgttttactcttgaga
actcggccggttgtgtccgtctcagcaaagctcagtttctccccgtctgaaatcaacctg
aatcattttgactgcctcggcagctcagacaacgctattcctgtcctctacctcagcacc
tgcttcagtatggcagaggacaccaaaagcaaagggggagtaaggagtggactaaatgta
tcactggagctcaaagctgacgctgtgagaaaggacagtcgtgcatttttcaataaggac
gataagacgtccaggagtctggtgaagtctgtgctcctgaacacagaggtttcctgttac
aatcatacagtctatatgaagagctgtgtgaaggacacggtgtctccagtcttattccga
ctcaacttcagccagtttgatcatcaaccagactactccaacgccatcctgaacatcgac
agcaaaaacactgctcatgtagaggttccctttcagattaactgcaaaaacacgacctgt
gtatcagacctgcagctgaactttaactttctgaacagcacattgctggtggtggatcag
gcatcatttattatccatgtgactttagtgaacacaggagacgactcgttcaacacaagc
gtggttctgttctaccctcctggattatcactctctctgttcaagaccatcaagcaaaac
agaaggactcgaagcagttgtggagatcgtgatgaaggagcgctgaacaaaaccacctgc
agtatcagtttaccggtttatcgcagtaacacagaggctgtgtttgagggtgtgtttcgc
atctctcgtgactacaactggactgacatcatgaaaatgacccttgtggccagcagtgat
aacaatagaaatacaagtagcaccacagtgatgaagactctgcctgttctgtacagtgta
gacgtggccgtcagctctgttcctgagctttctgtaacgtatctgaatttctctcttgga
gataaaggccctaaacctatccatattgtgtttaaggtgaggaatctgggactgaagggt
ctgccagtgacaataagcttcaggatgctgaatcacactgatgaaaagatcttccatctg
gataataattccatcttatcgaatattacagtctgtagcatcataccacctcagaaacat
gatgacattttgacggagcagtttgtgaatttcacctgtcgacctttctcactggatccc
gggtctgttgtctatattaatctgagtgcaaacgtcacgttccctaataaacagcaatat
tcagagaaatggtctttcagtggtttcaaggaggaggacgatttttcagtctttgctcag
ctggactttgataaaaagttttatcatcagttatctggtcacagcgagaacgattccagc
agatttcatcgtgctcatatcagtgtaaaagcagagctggttgttcctcctgatatgatt
atgataatcggaacaggcgtaggaggaggacttttactgcttttcatcttcatcatcctg
ctgtggaagtgtggtttctttaagcgaaagcggtttgcaccttgtgatgaagggagtgag
tacaggacagaagattatgatgaatgcggtgaaacaatgggaaagatggatcaatctcct
tccagatctgaagagaaaccgttcatccctgctgaaggaaaaggtgttggatctgaaaat
ggaagtaaagagaatggagagatggaaaagagtgtggagtga
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integrated database retrieval system
